RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	CACUL1	Q86Y37	369 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	FOXRED2	Q8IWF2	684 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	FAM185A	Q8N0U4	392 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	KIR2DL5A	Q8N109	375 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF664	Q8N3J9	261 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	JAGN1	Q8N5M9	183 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	LRTM2	Q8N967	370 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	NPEPL1	Q8NDH3	523 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	NOXO1	Q8NFA2	376 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	OR2L3	Q8NG85	312 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	OR51A2	Q8NGJ7	313 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	OR5H2	Q8NGV7	314 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	OR14L1P	Q8NHC6	308 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	CASTOR1	Q8WTX7	329 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	HMGB4	Q8WW32	186 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	ISOC2	Q96AB3	205 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	FGGY	Q96C11	551 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	DDIT4L	Q96D03	193 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	C4orf45	Q96LM5	186 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	SDF2	Q99470	211 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	PYGO2	Q9BRQ0	406 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	ZPBP	Q9BS86	351 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	CABLES2	Q9BTV7	478 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC25A18	Q9H1K4	315 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	KIR3DX1	Q9H7L2	352 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	MED20	Q9H944	212 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	CDH20	Q9HBT6	801 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	CRLF2	Q9HC73	371 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	GPR84	Q9NQS5	396 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	FSCN3	Q9NQT6	498 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	APOBEC3B	Q9UH17	382 aa	Known RBP	4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	PADI1	Q9ULC6	663 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	B3GALT5	Q9Y2C3	310 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	TMED7	Q9Y3B3	224 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	WSB1	Q9Y6I7	421 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582	PIKFYVE	Q9Y2I7	2098 aa		4.87	□□□□□ -1.63
CHD9-210	ENST00000564582		A0A1W2PPE2	198 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	MAP1LC3B2	A6NCE7	125 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	IFITM10	A6NMD0	228 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ZNF732	B4DXR9	585 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	RRP8	O43159	456 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ST8SIA3	O43173	380 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	PLRG1	O43660	514 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	B4GALT2	O60909	372 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	MTX2	O75431	263 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ERAL1	O75616	437 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	TNFSF13	O75888	250 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	VENTX	O95231	258 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CDS2	O95674	445 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CXCL14	O95715	111 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SNAI1	O95863	264 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	PLAU	P00749	431 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	PPBP	P02775	128 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	TRGC2	P03986	189 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	TYMS	P04818	313 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ARG1	P05089	322 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CSN2	P05814	226 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CTSD	P07339	412 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SOD3	P08294	240 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	THEGL	P0DJG4	465 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	NR2C1	P13056	603 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	F3	P13726	295 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CD99	P14209	185 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	HIST1H1C	P16403	213 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	IGFBP3	P17936	291 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	FUT1	P19526	365 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	HNF1A	P20823	631 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	GDI1	P31150	447 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CCKBR	P32239	447 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SFTPD	P35247	375 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ALDH3B1	P43353	468 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	GNG10	P50151	68 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	NPY4R	P50391	375 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CLDN6	P56747	220 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	FXYD6P3	P58550	94 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	UBE2N	P61088	152 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	VAMP2	P63027	116 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	MRPS11	P82912	194 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	PRDX1	Q06830	199 aa	Known RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	FUT5	Q11128	374 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC17A1	Q14916	467 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ZIC1	Q15915	447 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	ATP6V1F	Q16864	119 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	MPV17L	Q2QL34	196 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	IAH1	Q2TAA2	248 aa	Predicted RBP	4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	TMEM225	Q6GV28	225 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	C22orf39	Q6P5X5	142 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	DNM1P34	Q6PK57	102 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CLEC18B	Q6UXF7	455 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC24A5	Q71RS6	500 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	CYB561A3	Q8NBI2	242 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	SLC38A9	Q8NBW4	561 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	APCDD1L	Q8NCL9	501 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	OR4B1	Q8NGF8	309 aa		4.86	□□□□□ -1.63
CHD9-210	ENST00000564582	OR5D14	Q8NGL3	314 aa		4.86	□□□□□ -1.63

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