RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 CDRT1O95170 752 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 GYPAP02724 150 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 TFF1P04155 84 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 MUC1P15941 1255 aaPredicted RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 BCL3P20749 454 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 MICBQ29980 383 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 JAGN1Q8N5M9 183 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 NKAIN3Q8N8D7 197 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 ZSCAN4Q8NAM6 433 aaPredicted RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 PXT1Q8NFP0 134 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 ANGPTL6Q8NI99 470 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 TNFAIP8L1Q8WVP5 186 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 COX4I2Q96KJ9 171 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 C1orf147Q96MC9 270 aaPredicted RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 GPER1Q99527 375 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 GAL3ST1Q99999 423 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 RASL12Q9NYN1 266 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 IL36RNQ9UBH0 155 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 AK6Q9Y3D8 172 aaKnown RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 IGKV1D-17A0A075B6S4 117 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 TRAV38-1A0A0B4J264 116 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 LOC100506127A0A0U1RQW1 187 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 OR2AT4A6NND4 320 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 NXPH2O95156 264 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 WNT2P09544 360 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 CALCBP10092 127 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 PSG2P11465 335 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 TGFBR1P36897 503 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 C1orf100Q5SVJ3 147 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 STUMQ69YW2 141 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 MUC20Q8N307 709 aaPredicted RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 Q8NFD4 153 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 C12orf43Q96C57 262 aaKnown RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
KARS-204ENST00000564578 UQCC2Q9BRT2 126 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 SMURF1Q9HCE7 757 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 NLKQ9UBE8 527 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
KARS-204ENST00000564578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■■■■□ 24.3
KARS-204ENST00000564578 A0A1B0GW55 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 TRAPPC2LH3BP13 241 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 HNRNPCP07910 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L2P0CJ85 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L3P0CJ86 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L4P0CJ87 422 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L5P0CJ88 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L6P0CJ89 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L7P0CJ90 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 OR10A3P58181 314 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 SEC61A1P61619 476 aaKnown RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 ATPAF1Q5TC12 328 aaPredicted RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 FAM166AQ6J272 317 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 GDPGP1Q6ZNW5 385 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DCDC5Q6ZRR9 648 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 SLC16A12Q6ZSM3 486 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 FAM192AQ9GZU8 254 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 NAA50Q9GZZ1 169 aaKnown RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 SLITRK2Q9H156 845 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 ZNF665Q9H7R5 613 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 CTSZQ9UBR2 303 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DNAJB11Q9UBS4 358 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 DUX4Q9UBX2 424 aa10.4□□□□□ -0.74
KARS-204ENST00000564578 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.74
KARS-204ENST00000564578 A0A1W2PP11 408 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 RFPL4AA6NLU0 287 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 F5H0A9 414 aaPredicted RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 RFPL4AL1F8VTS6 287 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 AIREO43918 545 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 CYB5AP00167 134 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 SMIM21Q3B7S5 101 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 Q8IYB0 196 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 SPICQ8N5J4 248 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 CD177Q8N6Q3 437 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 PNLDC1Q8NA58 520 aaKnown RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 OR10K1Q8NGX5 313 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 SLC25A28Q96A46 364 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 KCTD7Q96MP8 289 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 TSC22D3Q99576 134 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 HMG20AQ9NP66 347 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 KAAG1Q9UBP8 84 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 GSTK1Q9Y2Q3 226 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 ARHGAP32A7KAX9 2087 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 A0A0G2JK05 382 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 FAM157AC9JC47 383 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 SMAD7O15105 426 aaKnown RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 SLC22A1O15245 554 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 SDC2P34741 201 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 MTNR1BP49286 362 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 CEBPDP49716 269 aaPredicted RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 LSM3P62310 102 aaKnown RBP10.39□□□□□ -0.75
KARS-204ENST00000564578 ZNF146Q15072 292 aa10.39□□□□□ -0.75
KARS-204ENST00000564578 TMEM249Q2WGJ8 235 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms