RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ASCC1Q8N9N2 400 aaKnown RBP11.28□□□□□ -0.6
CNOT1-206ENST00000564557 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 BPIFB6Q8NFQ5 453 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 OR10AC1Q8NH08 325 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 GCDHQ92947 438 aaPredicted RBP11.28□□□□□ -0.6
CNOT1-206ENST00000564557 EMG1Q92979 244 aaKnown RBP11.28□□□□□ -0.6
CNOT1-206ENST00000564557 CPNE2Q96FN4 548 aaPredicted RBP11.28□□□□□ -0.6
CNOT1-206ENST00000564557 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 PDCD1LG2Q9BQ51 273 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 ZMAT3Q9HA38 289 aaKnown RBP11.28□□□□□ -0.6
CNOT1-206ENST00000564557 ZNF222Q9UK12 451 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 MAB21L2Q9Y586 359 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 PCDHGB5Q9Y5G0 923 aa11.28□□□□□ -0.6
CNOT1-206ENST00000564557 IGKV1-27A0A075B6S5 117 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 CENPVL3A0A0U1RRI6 287 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 hCG_1809904A0A1W2PP81 198 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 A0A1W2PPE2 198 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 A0A1W2PR64 198 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 A0A1W2PRV1 198 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 E9PI62 339 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 FCN3O75636 299 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 MMP9P14780 707 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
CNOT1-206ENST00000564557 ST3GAL4Q11206 333 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 OR2G6Q5TZ20 316 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 C9orf139Q6ZV77 190 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 KIR3DL3Q8N743 410 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.61
CNOT1-206ENST00000564557 ZSCAN4Q8NAM6 433 aaPredicted RBP11.27□□□□□ -0.61
CNOT1-206ENST00000564557 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 GPR148Q8TDV2 347 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 GGHQ92820 318 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 SLC25A28Q96A46 364 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 ZNF649Q9BS31 505 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 SIRT7Q9NRC8 400 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 BABAM2Q9NXR7 383 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 NKX1-2Q9UD57 310 aaPredicted RBP11.27□□□□□ -0.61
CNOT1-206ENST00000564557 FAM96BQ9Y3D0 163 aa11.27□□□□□ -0.61
CNOT1-206ENST00000564557 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 M0R1W7 72 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 MYL12BO14950 172 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 IGHV1-69P01742 117 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 GNAO1P09471 354 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 RAB3AP20336 220 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 PRTN3P24158 256 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 SOX2P48431 317 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-206ENST00000564557 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 RPL31P62899 125 aaKnown RBP11.26□□□□□ -0.61
CNOT1-206ENST00000564557 UBA52P62987 128 aaKnown RBP11.26□□□□□ -0.61
CNOT1-206ENST00000564557 COL10A1Q03692 680 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 CDK5R1Q15078 307 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 RUSC1-AS1Q66K80 236 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 GDPD3Q7L5L3 318 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 ZDHHC22Q8N966 263 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 PPP1R35Q8TAP8 253 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 RFT1Q96AA3 541 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 GPER1Q99527 375 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 FAM234AQ9H0X4 552 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 ELL3Q9HB65 397 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-206ENST00000564557 HES4Q9HCC6 221 aa11.26□□□□□ -0.61
CNOT1-206ENST00000564557 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
CNOT1-206ENST00000564557 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-206ENST00000564557 SULT1B1O43704 296 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 XPNPEP2O43895 674 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 MT-ND2P03891 347 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 TK1P04183 234 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 TMEM225BP0DP42 221 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-206ENST00000564557 PRKACAP17612 351 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 BCL3P20749 454 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 TAS2R43P59537 309 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 PPP3R1P63098 170 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 DEFB112Q30KQ8 113 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 AHSA2Q719I0 299 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 SATL1Q86VE3 508 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 PARP16Q8N5Y8 322 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 OR5D18Q8NGL1 313 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 OR52N1Q8NH53 320 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 TFAP2CQ92754 450 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-206ENST00000564557 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
CNOT1-206ENST00000564557 METTL8Q9H825 291 aaKnown RBP11.25□□□□□ -0.61
CNOT1-206ENST00000564557 NOX4Q9NPH5 578 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms