RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZCCHC4Q9H5U6 513 aa16.35■□□□□ 0.21
CMTM3-207ENST00000564060 METTL8Q9H825 291 aaKnown RBP16.35■□□□□ 0.21
CMTM3-207ENST00000564060 MTCH1Q9NZJ7 389 aa16.35■□□□□ 0.21
CMTM3-207ENST00000564060 DIMT1Q9UNQ2 313 aaKnown RBP16.35■□□□□ 0.21
CMTM3-207ENST00000564060 DHDHQ9UQ10 334 aa16.35■□□□□ 0.21
CMTM3-207ENST00000564060 IGKV1-9A0A0C4DH69 117 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 TMEM89A2RUT3 159 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 RNASE1P07998 156 aaKnown RBP16.34■□□□□ 0.21
CMTM3-207ENST00000564060 CHRM2P08172 466 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 EEF1B2P24534 225 aaKnown RBP16.34■□□□□ 0.21
CMTM3-207ENST00000564060 POU3F4P49335 361 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 RUSC1-AS1Q66K80 236 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
CMTM3-207ENST00000564060 FAM185AQ8N0U4 392 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 BATF2Q8N1L9 274 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 OR10AC1Q8NH08 325 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 EMG1Q92979 244 aaKnown RBP16.34■□□□□ 0.21
CMTM3-207ENST00000564060 TMEM80Q96HE8 168 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 PDCD1LG2Q9BQ51 273 aa16.34■□□□□ 0.21
CMTM3-207ENST00000564060 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 A0A1W2PPE2 198 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 A0A1W2PR64 198 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 ALX3O95076 343 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 CD2P06729 351 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 COMPP49747 757 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-207ENST00000564060 ETV1P50549 477 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 DEFB112Q30KQ8 113 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 PARP16Q8N5Y8 322 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 OR5D13Q8NGL4 314 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 OR13C9Q8NGT0 318 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 UNKLQ9H9P5 680 aaKnown RBP16.33■□□□□ 0.2
CMTM3-207ENST00000564060 SEBOXQ9HB31 216 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-207ENST00000564060 ELL3Q9HB65 397 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-207ENST00000564060 RHOFQ9HBH0 211 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 SIRT7Q9NRC8 400 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 GLS2Q9UI32 602 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 STAB1Q9NY15 2570 aa16.33■□□□□ 0.2
CMTM3-207ENST00000564060 EFCAB10A6NFE3 127 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 E9PI62 339 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 SULT1B1O43704 296 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 TK1P04183 234 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 PIPP12273 146 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-207ENST00000564060 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-207ENST00000564060 RPL31P62899 125 aaKnown RBP16.32■□□□□ 0.2
CMTM3-207ENST00000564060 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 CDK5R1Q15078 307 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 SLC9A3R2Q15599 337 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 ASCC1Q8N9N2 400 aaKnown RBP16.32■□□□□ 0.2
CMTM3-207ENST00000564060 OR52N1Q8NH53 320 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 GPR148Q8TDV2 347 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 DUX5Q96PT3 197 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
CMTM3-207ENST00000564060 PCDHGB5Q9Y5G0 923 aa16.32■□□□□ 0.2
CMTM3-207ENST00000564060 MDFIC2A0A1B0GVS7 189 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 K7N7A8 449 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 HCKP08631 526 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 COL10A1Q03692 680 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 PDZK1IP1Q13113 114 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 SPIN3Q5JUX0 258 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 Q6YL49 198 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 FAM58AQ8N1B3 248 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 TMEM86BQ8N661 226 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 Q8N7P7 452 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 C1orf147Q96MC9 270 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-207ENST00000564060 FAM96BQ9Y3D0 163 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 POMT1Q9Y6A1 747 aa16.31■□□□□ 0.2
CMTM3-207ENST00000564060 HAX1O00165 279 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 MAGEB3O15480 346 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 HOXA3O43365 443 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-207ENST00000564060 INMTO95050 263 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 HKR1P10072 659 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-207ENST00000564060 FOXL1Q12952 345 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 OR2G6Q5TZ20 316 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 GDPD3Q7L5L3 318 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 PDZD9Q8IXQ8 264 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 SAXO1Q8IYX7 474 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 RPS4Y2Q8TD47 263 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 SSMEM1Q8WWF3 244 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 SMIM19Q96E16 107 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 SNX22Q96L94 193 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 C19orf12Q9NSK7 152 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 PLCXD1Q9NUJ7 323 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 BABAM2Q9NXR7 383 aa16.3■□□□□ 0.2
CMTM3-207ENST00000564060 SOX21Q9Y651 276 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-207ENST00000564060 F8VVB4 439 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 F8VWA3 439 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 RNASEK-C17orf49H0YIS7 233 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 SPRY1O43609 319 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-207ENST00000564060 HAND1O96004 215 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 FBP1P09467 338 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 GNAO1P09471 354 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 RAB3AP20336 220 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 BCL3P20749 454 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 UBE2E1P51965 193 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 TAS2R43P59537 309 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 ACSM1Q08AH1 577 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms