RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 IGKV1-9A0A0C4DH69 117 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 E9PI62 339 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 M0R1W7 72 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 MAGEB3O15480 346 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 POU3F4P49335 361 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 ST3GAL4Q11206 333 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 BAMBIQ13145 260 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 CDK5R1Q15078 307 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 METAP1DQ6UB28 335 aaPredicted RBP11.04□□□□□ -0.64
CLK3-213ENST00000563842 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
CLK3-213ENST00000563842 FGFRL1Q8N441 504 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 STX19Q8N4C7 294 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 CD177Q8N6Q3 437 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 OR13C9Q8NGT0 318 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 TFAP2CQ92754 450 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 GGHQ92820 318 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 EMG1Q92979 244 aaKnown RBP11.04□□□□□ -0.64
CLK3-213ENST00000563842 LHX4Q969G2 390 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 SLAMF9Q96A28 289 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 SEBOXQ9HB31 216 aaPredicted RBP11.04□□□□□ -0.64
CLK3-213ENST00000563842 NOX4Q9NPH5 578 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 NKX1-2Q9UD57 310 aaPredicted RBP11.04□□□□□ -0.64
CLK3-213ENST00000563842 PCDHGB5Q9Y5G0 923 aa11.04□□□□□ -0.64
CLK3-213ENST00000563842 KIAA2026Q5HYC2 2103 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 A0A1W2PPE2 198 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 A0A1W2PR64 198 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 OGG1O15527 345 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 SULT1B1O43704 296 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 IGHV1-69P01742 117 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 TFF1P04155 84 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 TK1P04183 234 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 HCKP08631 526 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 GNAO1P09471 354 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 PRTN3P24158 256 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 GTF2A1P52655 376 aaPredicted RBP11.03□□□□□ -0.64
CLK3-213ENST00000563842 TAS2R43P59537 309 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
CLK3-213ENST00000563842 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
CLK3-213ENST00000563842 ACTG1P63261 375 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 PDZK1IP1Q13113 114 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 OR2G6Q5TZ20 316 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 SAXO1Q8IYX7 474 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 FAM58AQ8N1B3 248 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 ZDHHC22Q8N966 263 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 BPIFB6Q8NFQ5 453 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 RPS4Y2Q8TD47 263 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 FBLIM1Q8WUP2 373 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 SLC25A28Q96A46 364 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 METTL8Q9H825 291 aaKnown RBP11.03□□□□□ -0.64
CLK3-213ENST00000563842 PSORS1C1Q9UIG5 152 aa11.03□□□□□ -0.64
CLK3-213ENST00000563842 CLDN34H7C241 214 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 K7N7A8 449 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 MYL12BO14950 172 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 INMTO95050 263 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 RAB3AP20336 220 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 EEF1B2P24534 225 aaKnown RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 SPIN3Q5JUX0 258 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 FAM185AQ8N0U4 392 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 ASCC1Q8N9N2 400 aaKnown RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 ZSCAN4Q8NAM6 433 aaPredicted RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 SMIM19Q96E16 107 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 SNX22Q96L94 193 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 ZNF48Q96MX3 618 aaPredicted RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 PRDM13Q9H4Q3 707 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 UNKLQ9H9P5 680 aaKnown RBP11.02□□□□□ -0.65
CLK3-213ENST00000563842 ESM1Q9NQ30 184 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 SCN3BQ9NY72 215 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 ZNF281Q9Y2X9 895 aa11.02□□□□□ -0.65
CLK3-213ENST00000563842 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 XPNPEP2O43895 674 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
CLK3-213ENST00000563842 BMXP51813 675 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 COL10A1Q03692 680 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 ZNF146Q15072 292 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 KISS1Q15726 138 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 AHSA2Q719I0 299 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 GDPD3Q7L5L3 318 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
CLK3-213ENST00000563842 RFT1Q96AA3 541 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
CLK3-213ENST00000563842 SIRT7Q9NRC8 400 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 CLEC2DQ9UHP7 191 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 ERGIC3Q9Y282 383 aa11.01□□□□□ -0.65
CLK3-213ENST00000563842 TMEM89A2RUT3 159 aa11□□□□□ -0.65
CLK3-213ENST00000563842 F8VVB4 439 aa11□□□□□ -0.65
CLK3-213ENST00000563842 F8VWA3 439 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms