RNA–Protein interactions for RNA: ENST00000562341.1

AP005233.1-201, humanhuman

TSL 2 BASIC

Gene AP005233.1, Length 2,424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.1-201ENST00000562341 CCDC54Q8NEL0 328 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 OR52M1Q8NGK5 317 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 RSRP1Q9BUV0 290 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 RBM24Q9BX46 236 aaKnown RBP18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 PLEK2Q9NYT0 353 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 ZDHHC8Q9ULC8 765 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 HSF4Q9ULV5 492 aa18.1■□□□□ 0.49
AP005233.1-201ENST00000562341 GLI4P10075 376 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 DTYMKP23919 212 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 HPSE2Q8WWQ2 592 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 NABP1Q96AH0 204 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 C18orf12Q96KH6 178 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 NSG1A0A0A6YYJ2 146 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 A0A1W2PPE2 198 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 FAM230AA0A1W2PPH8 454 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 ST8SIA3O43173 380 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 NQO2P16083 231 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 FKBP2P26885 142 aaKnown RBP18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 OTX1P32242 354 aaPredicted RBP18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 NHLH2Q02577 135 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 SNAI3Q3KNW1 292 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 ZNF600Q6ZNG1 722 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 OR5L1Q8NGL2 311 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 TMEM54Q969K7 222 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 SPTSSAQ969W0 71 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 REEP6Q96HR9 211 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 SLC2A9Q9NRM0 540 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 ZNF581Q9P0T4 197 aa18.09■□□□□ 0.49
AP005233.1-201ENST00000562341 CEP290O15078 2479 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 A0A1B0GV50 99 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 MED19A0JLT2 244 aaPredicted RBP18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 TIAF1O95411 115 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 OR13C7P0DN81 318 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 OR2B8PP59922 312 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 HIST1H3AP68431 136 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 HIST2H3PS2Q5TEC6 136 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 PRAMEF20Q5VT98 475 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 HIST2H3AQ71DI3 136 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 LGI3Q8N145 548 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 FADS6Q8N9I5 356 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 ZNF565Q8N9K5 539 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 TCTEX1D2Q8WW35 142 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 SPSB1Q96BD6 273 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 SGK3Q96BR1 496 aa18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 SPACA9Q96E40 222 aaPredicted RBP18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 RCL1Q9Y2P8 373 aaKnown RBP18.08■□□□□ 0.49
AP005233.1-201ENST00000562341 TXNL1O43396 289 aa18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 OR8U8P0C7N1 319 aa18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 TMEM182Q6ZP80 229 aaPredicted RBP18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 MALSU1Q96EH3 234 aa18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 MARS2Q96GW9 593 aaKnown RBP18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 ZNF385AQ96PM9 386 aaKnown RBP18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 RASL10BQ96S79 203 aa18.08■□□□□ 0.48
AP005233.1-201ENST00000562341 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 DHHO43323 396 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 LMO1P25800 156 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 RAB1AP62820 205 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 SHBQ15464 509 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 RAB30Q15771 203 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 SLC22A25Q6T423 547 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 FOXL2NBQ6ZUU3 175 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 C20orf196Q8IYI0 205 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 LFNGQ8NES3 379 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 CADM4Q8NFZ8 388 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 FAM213BQ8TBF2 198 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 DYRK2Q92630 601 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 SYT3Q9BQG1 590 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 OR51M1Q9H341 326 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 MTCH2Q9Y6C9 303 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 AP4M1O00189 453 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 EIF1BO60739 113 aaKnown RBP18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 CHATP28329 748 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 CLINT1Q14677 625 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 SLC25A45Q8N413 288 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 MSI2Q96DH6 328 aaKnown RBP18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 OR6C1Q96RD1 312 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 DEFB126Q9BYW3 111 aa18.07■□□□□ 0.48
AP005233.1-201ENST00000562341 IGHV3-15A0A0B4J1V0 119 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 TRAV20A0A0B4J274 112 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 NPIPA2E9PIF3 369 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 NPIPA3F8WFD2 350 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 PPP1CCP36873 323 aaKnown RBP18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 OR2AE1Q8NHA4 323 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 ANGPTL4Q9BY76 406 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 MIOXQ9UGB7 285 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 CCDC187A0A096LP49 1063 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 FAM221AA4D161 298 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 CLN5O75503 358 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 SCRG1O75711 98 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 EIF2S3P41091 472 aaKnown RBP18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 HAAOP46952 286 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 H3F3AP84243 136 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 FAM209BQ5JX69 171 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 BRICD5Q6PL45 260 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 SHANK1Q9Y566 2161 aa18.06■□□□□ 0.48
AP005233.1-201ENST00000562341 PHF1O43189 567 aaPredicted RBP18.05■□□□□ 0.48
AP005233.1-201ENST00000562341 GNMTQ14749 295 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms