RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 SPOCK1Q08629 439 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 BATFQ16520 125 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 C1orf189Q5VU69 101 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 LINC00114Q6XXX2 140 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 DPY19L4Q7Z388 723 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 OR6N2Q8NGY6 317 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 METTL21AQ8WXB1 218 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 FAM46BQ96A09 425 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 TVP23CQ96ET8 276 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 WDR76Q9H967 626 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 PARD6AQ9NPB6 346 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 H7C1C5 153 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 M0QZK8 103 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 ZNF264O43296 627 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 GGCTO75223 188 aaKnown RBP11.67□□□□□ -0.54
CLK3-206ENST00000562078 SRP19P09132 144 aaKnown RBP11.67□□□□□ -0.54
CLK3-206ENST00000562078 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 FGF5P12034 268 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 CXCR1P25024 350 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 LCN6P62502 163 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 COL10A1Q03692 680 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 P2RY6Q15077 328 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 CD226Q15762 336 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
CLK3-206ENST00000562078 CDC20BQ86Y33 519 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 PRR22Q8IZ63 422 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 OR4K15Q8NH41 348 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 PRRX2Q99811 253 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 NUDT22Q9BRQ3 303 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 DNAJC4Q9NNZ3 241 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 MKKSQ9NPJ1 570 aaPredicted RBP11.67□□□□□ -0.54
CLK3-206ENST00000562078 POLR3KQ9Y2Y1 108 aaPredicted RBP11.67□□□□□ -0.54
CLK3-206ENST00000562078 V9GYS6 101 aa11.67□□□□□ -0.54
CLK3-206ENST00000562078 IGKV3D-11A0A0A0MRZ8 115 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 XKRY2A2RUG3 117 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 XKRYO14609 159 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 DEDDO75618 318 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SCGNO76038 276 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 DIRAS3O95661 229 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 FBLP22087 321 aaKnown RBP11.66□□□□□ -0.54
CLK3-206ENST00000562078 TFPI2P48307 235 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 C1orf194Q5T5A4 169 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 GUSBP11Q6P575 273 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 ZNF880Q6PDB4 577 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SLC23A3Q6PIS1 610 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SLC35D2Q76EJ3 337 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 GALNTL5Q7Z4T8 443 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SLC35E3Q7Z769 313 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 D2HGDHQ8N465 521 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 TAAR8Q969N4 342 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 NIPSNAP3BQ9BS92 247 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 RTBDNQ9BSG5 229 aaPredicted RBP11.66□□□□□ -0.54
CLK3-206ENST00000562078 LIPGQ9Y5X9 500 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 A0A1B0GW64 132 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 DDAH2O95865 285 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SCGB1D2O95969 90 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 CD82P27701 267 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 H3F3AP84243 136 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 IQCJQ1A5X6 159 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 DEGS2Q6QHC5 323 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 DPY19L2P2Q6ZN68 376 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 OR10A7Q8NGE5 316 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 OR4D6Q8NGJ1 314 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 LPAR4Q99677 370 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 ARRDC1-AS1Q9H2J1 176 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 CDH20Q9HBT6 801 aa11.66□□□□□ -0.54
CLK3-206ENST00000562078 RALGAPA1Q6GYQ0 2036 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 KIR2DL5BA0A0G2JN68 375 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 KIR2DL5BA0A0G2JPC4 375 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 MPLP40238 635 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 POLR2HP52434 150 aaKnown RBP11.65□□□□□ -0.54
CLK3-206ENST00000562078 ELLP55199 621 aaPredicted RBP11.65□□□□□ -0.54
CLK3-206ENST00000562078 SOX8P57073 446 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 TLE4Q04727 773 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 SQSTM1Q13501 440 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 PMS2P11Q13670 270 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 CBLN3Q6UW01 205 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 KIR2DL5AQ8N109 375 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 LFNGQ8NES3 379 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 WFIKKN1Q96NZ8 548 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 GPR173Q9NS66 373 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 GAB2Q9UQC2 676 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 MEMO1Q9Y316 297 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 STRAPQ9Y3F4 350 aaKnown RBP11.65□□□□□ -0.54
CLK3-206ENST00000562078 R4GN57 208 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 CDC14CA4D256 554 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 SCDO00767 359 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 UTS2O95399 124 aa11.65□□□□□ -0.54
CLK3-206ENST00000562078 CNOT4O95628 575 aaKnown RBP11.65□□□□□ -0.54
CLK3-206ENST00000562078 IL33O95760 270 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms