RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GNB3P16520 340 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 RPL23AP62750 156 aaKnown RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 MAML2Q8IZL2 1156 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 LYG1Q8N1E2 194 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 OR4D6Q8NGJ1 314 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 ZCCHC14Q8WYQ9 949 aaKnown RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 CNTD2Q9H8S5 307 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 SDK1Q7Z5N4 2213 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 TRAV39A0A0B4J263 110 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 EXOSC7Q15024 291 aaKnown RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 MEP1BQ16820 701 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 RTN4RL2Q86UN3 420 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 OR2G3Q8NGZ4 309 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 CLDND2Q8NHS1 167 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 EMG1Q92979 244 aaKnown RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 VPS25Q9BRG1 176 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 WWTR1Q9GZV5 400 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 RBKSQ9H477 322 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 THAP10Q9P2Z0 257 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 ANAPC10Q9UM13 185 aa16.36■□□□□ 0.21
RAB40C-206ENST00000561781 ARID1AO14497 2285 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 CEACAM1P13688 526 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 CPMP14384 443 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 FAM53BQ14153 422 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 LHFPL1Q86WI0 220 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 RAB42Q8N4Z0 105 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 ZNF321PQ8N8H1 164 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 TMEM105Q8N8V8 129 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 KCNE4Q8WWG9 221 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 LPAR4Q99677 370 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 PCGF1Q9BSM1 259 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 CSTL1Q9H114 145 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 NDUFS8O00217 210 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 GLRA1P23415 457 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 RAB28P51157 221 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 CDK3Q00526 305 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 GPR18Q14330 331 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 SP5Q6BEB4 398 aaPredicted RBP16.35■□□□□ 0.21
RAB40C-206ENST00000561781 LAMP3Q9UQV4 416 aa16.35■□□□□ 0.21
RAB40C-206ENST00000561781 RCL1Q9Y2P8 373 aaKnown RBP16.35■□□□□ 0.21
RAB40C-206ENST00000561781 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 IGHEP01854 428 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 HBE1P02100 147 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 HOXB2P14652 356 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 DNASE1L1P49184 302 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 CTXN1P60606 82 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 MFGE8Q08431 387 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-206ENST00000561781 VHLLQ6RSH7 139 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 TEX43Q6ZNM6 134 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 ZFP62Q8NB50 900 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-206ENST00000561781 OR5H2Q8NGV7 314 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 TOMM40O96008 361 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 PFN1P07737 140 aaKnown RBP16.34■□□□□ 0.21
RAB40C-206ENST00000561781 TNFRSF4P43489 277 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 IL24Q13007 206 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 SLC17A1Q14916 467 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 FCRL6Q6DN72 434 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 SDSLQ96GA7 329 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 IMMP2LQ96T52 175 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 SDF2L1Q9HCN8 221 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 B3GALT5Q9Y2C3 310 aa16.34■□□□□ 0.21
RAB40C-206ENST00000561781 AQP7O14520 342 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF266Q14584 549 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 FAM90A2PQ658T7 463 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 OR2I1PQ8NGU4 316 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 OTOSQ8NHW6 89 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 MOB3AQ96BX8 217 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 TPSD1Q9BZJ3 242 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 TMEM74BQ9NUR3 256 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 C14orf166Q9Y224 244 aaKnown RBP16.33■□□□□ 0.2
RAB40C-206ENST00000561781 MRPS17Q9Y2R5 130 aaKnown RBP16.33■□□□□ 0.2
RAB40C-206ENST00000561781 SCDO00767 359 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 OR2J2O76002 312 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF43P17038 809 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 NTSR1P30989 418 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 WNT5AP41221 380 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF41P51814 821 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-206ENST00000561781 ENDOGQ14249 297 aaKnown RBP16.33■□□□□ 0.2
RAB40C-206ENST00000561781 ACTL10Q5JWF8 245 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 SHISA5Q8N114 240 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 CIB3Q96Q77 187 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-206ENST00000561781 OR8B4Q96RC9 309 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 GPR84Q9NQS5 396 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 RNF150Q9ULK6 438 aa16.33■□□□□ 0.2
RAB40C-206ENST00000561781 FANCMQ8IYD8 2048 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 LOC105371242A0A075B767 164 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 NSG1A0A0A6YYJ2 146 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 CTSVO60911 334 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 NDUFB8O95169 186 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 CSNK1A1P48729 337 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 RAB11AP62491 216 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 ZFP36L1Q07352 338 aaKnown RBP16.32■□□□□ 0.2
RAB40C-206ENST00000561781 DPTQ07507 201 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 UNC119Q13432 240 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 ALG10Q5BKT4 473 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 TOMM20LQ6UXN7 152 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF765Q7L2R6 523 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 LINC01551Q86U37 167 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 CATSPERDQ86XM0 798 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms