RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF788Q6ZQV5 615 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 LHFPL2Q6ZUX7 228 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 RNF144BQ7Z419 303 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 MKXQ8IYA7 352 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CMTM4Q8IZR5 234 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CD177Q8N6Q3 437 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 GPR148Q8TDV2 347 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 TMEM158Q8WZ71 300 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 GHSRQ92847 366 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 MYDGFQ969H8 173 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 C10orf35Q96D05 121 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 WDFY2Q96P53 400 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 PKIBQ9C010 78 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CNTD2Q9H8S5 307 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 SIRT7Q9NRC8 400 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 RBFOX1Q9NWB1 397 aaKnown RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 RASL12Q9NYN1 266 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 MTCH1Q9NZJ7 389 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 PSORS1C1Q9UIG5 152 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 POLR3KQ9Y2Y1 108 aaPredicted RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 MAB21L2Q9Y586 359 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 SIGLEC5O15389 551 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 SULT1B1O43704 296 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 FCN3O75636 299 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 LIPFP07098 398 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 HSMCR30P0CW71 290 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 CELP19835 753 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 GABRR1P24046 479 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 EDDM3BP56851 147 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 PAX2Q02962 417 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 COL10A1Q03692 680 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 MED22Q15528 200 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 CCDC58Q4VC31 144 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 KLF17Q5JT82 389 aaPredicted RBP8.37□□□□□ -1.07
HERC1-212ENST00000561348 Q6ZSR3 168 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 UTS2BQ765I0 119 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 SIGLECL1Q8N7X8 197 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 OR52N1Q8NH53 320 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 RGP1Q92546 391 aaPredicted RBP8.37□□□□□ -1.07
HERC1-212ENST00000561348 SGCDQ92629 289 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 TMEM106AQ96A25 262 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 SPSB1Q96BD6 273 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 NRIP2Q9BQI9 281 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 JAM3Q9BX67 310 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 SUCNR1Q9BXA5 334 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 CHST6Q9GZX3 395 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 IL36RNQ9UBH0 155 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 KAAG1Q9UBP8 84 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 ING4Q9UNL4 249 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 GSTK1Q9Y2Q3 226 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 ZNF281Q9Y2X9 895 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 TPRKBQ9Y3C4 175 aa8.37□□□□□ -1.07
HERC1-212ENST00000561348 ANK3Q12955 4377 aaKnown RBP8.37□□□□□ -1.07
HERC1-212ENST00000561348 MDFIC2A0A1B0GVS7 189 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 H0YJX3 145 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 SIRPB1O00241 398 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 VENTXO95231 258 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 CDK1P06493 297 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 MYF6P23409 242 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 VHLP40337 213 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 HSPA13P48723 471 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 WNT4P56705 351 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 ACTG1P63261 375 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 PDZK1IP1Q13113 114 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 BAMBIQ13145 260 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 BLMHQ13867 455 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 PDCD1Q15116 288 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 KISS1Q15726 138 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 KRTAP24-1Q3LI83 254 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 ATPAF1Q5TC12 328 aaPredicted RBP8.36□□□□□ -1.07
HERC1-212ENST00000561348 GDPD3Q7L5L3 318 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 KRT74Q7RTS7 529 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 VMO1Q7Z5L0 202 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 FAM58AQ8N1B3 248 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
HERC1-212ENST00000561348 DNAAF1Q8NEP3 725 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 OR51A2Q8NGJ7 313 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 OR10K1Q8NGX5 313 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 TNFAIP8L1Q8WVP5 186 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 UPRTQ96BW1 309 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 SMIM19Q96E16 107 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 S100A13Q99584 98 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 DCTN5Q9BTE1 182 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 TMED9Q9BVK6 235 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 MND1Q9BWT6 205 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 DNTTIP1Q9H147 329 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 PLCXD1Q9NUJ7 323 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 CKLFQ9UBR5 152 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 GLS2Q9UI32 602 aa8.36□□□□□ -1.07
HERC1-212ENST00000561348 OGG1O15527 345 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 HTR3BO95264 441 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 HAND1O96004 215 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 KNG1P01042 644 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 MAS1P04201 325 aa8.35□□□□□ -1.07
HERC1-212ENST00000561348 CHRM2P08172 466 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms