RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 NPBWR2P48146 333 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 PPP3R1P63098 170 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.17
RPL28-209ENST00000560055 DGUOKQ16854 277 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 LIPKQ5VXJ0 399 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 FAHD2BQ6P2I3 314 aaPredicted RBP13.96□□□□□ -0.17
RPL28-209ENST00000560055 UNQ9370/PRO34162Q6UXP9 181 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 Q8IYB0 196 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 SAXO1Q8IYX7 474 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 BATF2Q8N1L9 274 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 FGFRL1Q8N441 504 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 CD177Q8N6Q3 437 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 ZSCAN4Q8NAM6 433 aaPredicted RBP13.96□□□□□ -0.17
RPL28-209ENST00000560055 OR52N4Q8NGI2 321 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 RAB40AQ8WXH6 277 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 THRSPQ92748 146 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 UFD1Q92890 307 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 FAHD2AQ96GK7 314 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 MGLLQ99685 303 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 SHARPINQ9H0F6 387 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 TMEM138Q9NPI0 162 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 OPN4Q9UHM6 478 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 LRRC42Q9Y546 428 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 MAB21L2Q9Y586 359 aa13.96□□□□□ -0.17
RPL28-209ENST00000560055 LOC105371242A0A075B767 164 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 SPRY1O43609 319 aaPredicted RBP13.95□□□□□ -0.18
RPL28-209ENST00000560055 KDM4BO94953 1096 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 HSMCR30P0CW71 290 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 BCL3P20749 454 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 IL13RA1P78552 427 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 PAX8Q06710 450 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 INSL4Q14641 139 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 CHRFAM7AQ494W8 412 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 IL17RELQ6ZVW7 336 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 ZNF367Q7RTV3 350 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 OR5D18Q8NGL1 313 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 CPNE2Q96FN4 548 aaPredicted RBP13.95□□□□□ -0.18
RPL28-209ENST00000560055 MED30Q96HR3 178 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 MDFIQ99750 246 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 TMED9Q9BVK6 235 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 RBFOX1Q9NWB1 397 aaKnown RBP13.95□□□□□ -0.18
RPL28-209ENST00000560055 FOXJ3Q9UPW0 622 aa13.95□□□□□ -0.18
RPL28-209ENST00000560055 COL6A5A8TX70 2615 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 KIR2DS1A0A191URI9 304 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 A0A1W2PPK0 400 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 MAGEA13PA6NCF6 341 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 GABRPO00591 440 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 GPR37O15354 613 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 MAGEB3O15480 346 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 ANGPTL7O43827 346 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 CYB5AP00167 134 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 HNF1AP20823 631 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 MAPK3P27361 379 aaPredicted RBP13.94□□□□□ -0.18
RPL28-209ENST00000560055 BDKRB2P30411 391 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 PRDX2P32119 198 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 TGFBR2P37173 567 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 GABRA2P47869 451 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 GP2P55259 537 aaKnown RBP13.94□□□□□ -0.18
RPL28-209ENST00000560055 IKZF1Q13422 519 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 ACSM3Q53FZ2 586 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 CD276Q5ZPR3 534 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 PHC2Q8IXK0 858 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 SPARTQ8N0X7 666 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 ST8SIA4Q92187 359 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 C7orf69Q9H7B7 122 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 SEBOXQ9HB31 216 aaPredicted RBP13.94□□□□□ -0.18
RPL28-209ENST00000560055 RHOFQ9HBH0 211 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 CKLFQ9UBR5 152 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 METRNQ9UJH8 293 aa13.94□□□□□ -0.18
RPL28-209ENST00000560055 SF3B6Q9Y3B4 125 aaKnown RBP13.94□□□□□ -0.18
RPL28-209ENST00000560055 NDUFB3O43676 98 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 ENSAO43768 121 aaKnown RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 INMTO95050 263 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 ECDO95905 644 aaPredicted RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 SFTPBP07988 381 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 CEBPDP49716 269 aaPredicted RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 CAV3P56539 151 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 KCTD21Q4G0X4 260 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 LRRC10Q5BKY1 277 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 DDI2Q5TDH0 399 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 UBE2UQ5VVX9 321 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 ZNF773Q6PK81 442 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 BTN2A1Q7KYR7 527 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 LYPD6Q86Y78 171 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 SVOPQ8N4V2 548 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 ZNRF1Q8ND25 227 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 PXT1Q8NFP0 134 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 EMG1Q92979 244 aaKnown RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 NUDT16L1Q9BRJ7 211 aaKnown RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 HMG20AQ9NP66 347 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 IL36RNQ9UBH0 155 aa13.93□□□□□ -0.18
RPL28-209ENST00000560055 SLC25A10Q9UBX3 287 aaPredicted RBP13.93□□□□□ -0.18
RPL28-209ENST00000560055 FSHBP01225 129 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 FAM157CP0CG43 387 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
RPL28-209ENST00000560055 ZNF93P35789 620 aaPredicted RBP13.92□□□□□ -0.18
RPL28-209ENST00000560055 RPS25P62851 125 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms