RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CFHR2P36980 270 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 SNRPD2P62316 118 aaKnown RBP10.3□□□□□ -0.76
HERC1-205ENST00000559886 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 C15orf40Q8WUR7 153 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 CCDC32Q9BV29 185 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 FN3KRPQ9HA64 309 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 FAIMQ9NVQ4 179 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 C1orf123Q9NWV4 160 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 DANCRP0C864 163 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 TMEM50BP56557 158 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 CCL8P80075 99 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
HERC1-205ENST00000559886 TESK1Q15569 626 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 TAF9Q16594 264 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 PCGF3Q3KNV8 242 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 FAM58AQ8N1B3 248 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 OR10Z1Q8NGY1 313 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 ERGIC1Q969X5 290 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 HES4Q9HCC6 221 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 GCM1Q9NP62 436 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 CBLN4Q9NTU7 201 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
HERC1-205ENST00000559886 DSCAMO60469 2012 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 TANC2Q9HCD6 1990 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 GEMIN2O14893 280 aaKnown RBP10.29□□□□□ -0.76
HERC1-205ENST00000559886 TNFRSF1AP19438 455 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 PMELP40967 661 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 AGAP6Q5VW22 663 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 DTX2Q86UW9 622 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 SNX29P2Q8IUI4 249 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 Q8N402 240 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
HERC1-205ENST00000559886 EGLN1Q9GZT9 426 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 DCHS2Q6V1P9 2916 aa10.29□□□□□ -0.76
HERC1-205ENST00000559886 hCG_1807616A0A1W2PRN6 198 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A10PA6NDY2 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A18PA6NE21 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A16PA6NEW6 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A20PA6NIJ5 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A8PA6NJQ4 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A7PA6NKC0 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A22PA8MWA6 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A12PA8MX19 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A5PA8MXJ8 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A23PA8MXZ1 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 CD8AP01732 235 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A15PP0C7V4 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A13PP0C7W8 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A14PP0C7W9 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 FAM90A24PP0C7X0 464 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 PRKACAP17612 351 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 GABRR1P24046 479 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
HERC1-205ENST00000559886 PPOXP50336 477 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 BAK1Q16611 211 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 ZNF260Q3ZCT1 412 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 SIGIRRQ6IA17 410 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 CHST4Q8NCG5 386 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 Q8TCH9 128 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 RAB3CQ96E17 227 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 AUNIPQ9H7T9 357 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 PALMDQ9NP74 551 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 IL36RNQ9UBH0 155 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 UTP20O75691 2785 aaKnown RBP10.28□□□□□ -0.76
HERC1-205ENST00000559886 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 UPK1BO75841 260 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 NXPH2O95156 264 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 SOD3P08294 240 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 PTHLHP12272 177 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 MRPS10P82664 201 aaKnown RBP10.28□□□□□ -0.76
HERC1-205ENST00000559886 C16orf87Q6PH81 154 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 LRRC29Q8WV35 223 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 SAP30LQ9HAJ7 183 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 DECR2Q9NUI1 292 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 PPP1R3CQ9UQK1 317 aa10.28□□□□□ -0.76
HERC1-205ENST00000559886 A1L4Q6 167 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 SRRM5B3KS81 715 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 GSTZ1O43708 216 aaPredicted RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 LHBP01229 141 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 MELTFP08582 738 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 CSF3P09919 207 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 HIST1H1DP16402 221 aaKnown RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 IFITM3Q01628 133 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 IL13RA2Q14627 380 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 MPV17LQ2QL34 196 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 CDNFQ49AH0 187 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 SP5Q6BEB4 398 aaPredicted RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 DNM1P46Q6ZS02 220 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 Q6ZTK2 550 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 LINC00596Q86U02 117 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 OR8H2Q8N162 312 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.77
HERC1-205ENST00000559886 ARHGAP5-AS1Q96IT6 56 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 WDR13Q9H1Z4 485 aa10.27□□□□□ -0.77
HERC1-205ENST00000559886 ZMAT3Q9HA38 289 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms