RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PRKACAP17612 351 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 MYL12AP19105 171 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 CFPP27918 469 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 EDDM3BP56851 147 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 RPL31P62899 125 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 COL10A1Q03692 680 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 FOXL1Q12952 345 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 MRPL28Q13084 256 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 MED21Q13503 144 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 EDDM3AQ14507 147 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 AWAT1Q58HT5 328 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 ZNF691Q5VV52 312 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 NCR3LG1Q68D85 454 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 Q6YL49 198 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 TMPRSS11AQ6ZMR5 421 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 LHFPL2Q6ZUX7 228 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 GDPD3Q7L5L3 318 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 Q8IYB0 196 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 PNKDQ8N490 385 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 PACRGLQ8N7B6 248 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 Q8N7P7 452 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 DNAAF1Q8NEP3 725 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 TBC1D15Q8TC07 691 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 SSMEM1Q8WWF3 244 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 RNF166Q96A37 237 aaPredicted RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 SPSB1Q96BD6 273 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 DMRTB1Q96MA1 342 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 SPACA5Q96QH8 159 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 VCXQ9H320 206 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 ZCCHC4Q9H5U6 513 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 METTL8Q9H825 291 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 HES4Q9HCC6 221 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 C8orf4Q9NR00 106 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 CHCHD3Q9NX63 227 aaKnown RBP6.73□□□□□ -1.33
SNX1-207ENST00000559401 MTCH1Q9NZJ7 389 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 DHDHQ9UQ10 334 aa6.73□□□□□ -1.33
SNX1-207ENST00000559401 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 IGKV1-9A0A0C4DH69 117 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 hCG_1809904A0A1W2PP81 198 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PPE2 198 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PR64 198 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PRV1 198 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 MEX3AA1L020 520 aaKnown RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 MEIOCA2RUB1 952 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 BTBD17A6NE02 478 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 F8VVB4 439 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 F8VWA3 439 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 RNASEK-C17orf49H0YIS7 233 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 CLDN34H7C241 214 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 ZFPL1O95159 310 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 HAND1O96004 215 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 TK1P04183 234 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 CHRM2P08172 466 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 RPSAP08865 295 aaKnown RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 FBP1P09467 338 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 LIMS3P0CW19 117 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 LIMS4P0CW20 117 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 CCL3L1P16619 93 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 BCL3P20749 454 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 OMGP23515 440 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 GABRR1P24046 479 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 COX7A1P24310 79 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 DUSP1P28562 367 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 SAA4P35542 130 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 SOX2P48431 317 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 ETV1P50549 477 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 GTF2A1P52655 376 aaPredicted RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 ERVK11-1P61568 191 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 TUSC1Q2TAM9 212 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 OR2G6Q5TZ20 316 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 C16orf87Q6PH81 154 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 METAP1DQ6UB28 335 aaPredicted RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 UTS2BQ765I0 119 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 C8orf59Q8N0T1 100 aaPredicted RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 FAM58AQ8N1B3 248 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 PIP4P2Q8N4L2 257 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 ZSCAN4Q8NAM6 433 aaPredicted RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 OR5D13Q8NGL4 314 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 HAVCR2Q8TDQ0 301 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 TAF15Q92804 592 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNX1-207ENST00000559401 PDCD1LG2Q9BQ51 273 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 CHIAQ9BZP6 476 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 CHST6Q9GZX3 395 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 FAM234AQ9H0X4 552 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 FGF20Q9NP95 211 aaPredicted RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 RBFOX1Q9NWB1 397 aaKnown RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 IL36RNQ9UBH0 155 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 GLS2Q9UI32 602 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 GSTK1Q9Y2Q3 226 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 EXOSC1Q9Y3B2 195 aaKnown RBP6.72□□□□□ -1.33
SNX1-207ENST00000559401 PCDHGB5Q9Y5G0 923 aa6.72□□□□□ -1.33
SNX1-207ENST00000559401 K7N7A8 449 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 SIRPB1O00241 398 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 MAGEB3O15480 346 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 SULT1B1O43704 296 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 IGHV4-59P01825 116 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 CD2P06729 351 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 TMEM225BP0DP42 221 aa6.71□□□□□ -1.34
SNX1-207ENST00000559401 DCKP27707 260 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms