RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAM168AQ92567 244 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 ARL11Q969Q4 196 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 FOXRED1Q96CU9 486 aaPredicted RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 SAT2Q96F10 170 aaPredicted RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 NARS2Q96I59 477 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 ADAD1Q96M93 576 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 ZNF385AQ96PM9 386 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 TSNAXQ99598 290 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 PDCD1LG2Q9BQ51 273 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 UQCC2Q9BRT2 126 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 TCEAL7Q9BRU2 100 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 PDCD10Q9BUL8 212 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 ALG12Q9BV10 488 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 SEC11CQ9BY50 192 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 ADAM19Q9H013 955 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 NELFAQ9H3P2 528 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 WDR76Q9H967 626 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 SEC61A2Q9H9S3 476 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 SERINC1Q9NRX5 453 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 TMEM100Q9NV29 134 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 CKLFQ9UBR5 152 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 ZMAT5Q9UDW3 170 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 CDC42EP3Q9UKI2 254 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 IER3IP1Q9Y5U9 82 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 TENM1Q9UKZ4 2725 aa5.05□□□□□ -1.6
USP3-212ENST00000559276 HEATR1Q9H583 2144 aaKnown RBP5.05□□□□□ -1.6
USP3-212ENST00000559276 TMED7-TICAM2A0A0A6YYA0 188 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 A0A0B4J2A0 478 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 IGHV1-18A0A0C4DH31 117 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 IGHV4-61A0A0C4DH41 118 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 TMEM272A0A1B0GTI8 110 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 METTL21EPA6NDL7 271 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 F8VVB4 439 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 F8VWA3 439 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 F8W036 122 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ZNF208O43345 1280 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 MRPL33O75394 65 aaKnown RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 KDM4BO94953 1096 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 SPDEFO95238 335 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RAB3DO95716 219 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 CYB5AP00167 134 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RENP00797 406 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 GYPBP06028 91 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 SMIM6P0DI80 62 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 TPT1P13693 172 aaKnown RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 SLC25A16P16260 332 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ADRA2CP18825 462 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 FUT1P19526 365 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ALOX5APP20292 161 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 PVALBP20472 110 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 USF1P22415 310 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 CD34P28906 385 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 CX3CR1P49238 355 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RAB13P51153 203 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 HCCSP53701 268 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 DEFA5Q01523 94 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ROM1Q03395 351 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 HMGN3Q15651 99 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 HIKESHIQ53FT3 197 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ACTBL2Q562R1 376 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 LIPNQ5VXI9 398 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 WBP2NLQ6ICG8 309 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 FAM166AQ6J272 317 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 HAGHLQ6PII5 290 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 IL17RELQ6ZVW7 336 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 LYG2Q86SG7 212 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 SYT9Q86SS6 491 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 SLC25A42Q86VD7 318 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 FBXL14Q8N1E6 418 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 C17orf78Q8N4C9 275 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RFLNBQ8N5W9 214 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 ZNF676Q8N7Q3 588 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 C1orf162Q8NEQ5 155 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 SLC30A7Q8NEW0 376 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 BPIFCQ8NFQ6 507 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 DMBX1Q8NFW5 382 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 OR51S1Q8NGJ8 323 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 OR6K6Q8NGW6 343 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 THAP6Q8TBB0 222 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 STK35Q8TDR2 534 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 MITD1Q8WV92 249 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 TMEM106AQ96A25 262 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 RNF166Q96A37 237 aaPredicted RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 TMEM45BQ96B21 275 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 FAM3DQ96BQ1 224 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 MSI2Q96DH6 328 aaKnown RBP5.04□□□□□ -1.6
USP3-212ENST00000559276 C4orf45Q96LM5 186 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 KCNK17Q96T54 332 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 PHB2Q99623 299 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 POFUT1Q9H488 388 aa5.04□□□□□ -1.6
USP3-212ENST00000559276 MMP26Q9NRE1 261 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms