RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SOCS1O15524 211 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 CYTH3O43739 400 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 MPZL2O60487 215 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 PSIP1O75475 530 aaKnown RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 CYB5R3P00387 301 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 IGLV3-25P01717 112 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 IL4P05112 153 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 OR4Q2P0C623 313 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 LIMS3P0CW19 117 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 LIMS4P0CW20 117 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SCGB1C2P0DMR2 95 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ZNF3P17036 446 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 IL3RAP26951 378 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 PSMB6P28072 239 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 GTF2H1P32780 548 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 RCVRNP35243 200 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 CBX5P45973 191 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 CXCL12P48061 93 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TAS2R43P59537 309 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 RAB8AP61006 207 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 HBG1P69891 147 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 HBG2P69892 147 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 PRDX1Q06830 199 aaKnown RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SLAMF1Q13291 335 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 C16orf72Q14CZ0 275 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TMEM249Q2WGJ8 235 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 FBXL19-AS1Q494R0 122 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 KLHL12Q53G59 568 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ZNF684Q5T5D7 378 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 FAM231DQ6ZW35 169 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ITPRIPQ8IWB1 547 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ORMDL3Q8N138 153 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 OR2Z1Q8NG97 314 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 OR5M1Q8NGP8 315 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ZNF420Q8TAQ5 688 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ACTL9Q8TC94 416 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SCGB1C1Q8TD33 95 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ORAOV1Q8WV07 137 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TWIST2Q8WVJ9 160 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 DNAJB3Q8WWF6 145 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 RORBQ92753 470 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TNFRSF14Q92956 283 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 FAM104AQ969W3 186 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 CPNE4Q96A23 557 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SLC25A46Q96AG3 418 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 DDIT4LQ96D03 193 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 STARD4Q96DR4 205 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SMARCD1Q96GM5 515 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 OR10C1Q96KK4 312 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TMEM56Q96MV1 263 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SPACA5Q96QH8 159 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 SDHCQ99643 169 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 FAAP24Q9BTP7 215 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 TAPBPLQ9BX59 468 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ULBP1Q9BZM6 244 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 LHX5Q9H2C1 402 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ANAPC11Q9NYG5 84 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 COMMD9Q9P000 198 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 KLK12Q9UKR0 248 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 YTHDF2Q9Y5A9 579 aaKnown RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 PUS1Q9Y606 427 aaKnown RBP eCLIP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 AGRNO00468 2067 aa1.5□□□□□ -2.17
GABPB1-209ENST00000559100 ZNF646O15015 1829 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-209ENST00000559100 MTCL1Q9Y4B5 1905 aaKnown RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 TRAV8-2A0A0B4J237 113 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CCL15-CCL14A0A0B4J2E2 113 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 A0A1B0GX12 115 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 TMEM213A2RRL7 107 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 C7orf66A4D0T2 115 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 EFCAB9A8MZ26 197 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 C9J4A7 227 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 C9JQL5 133 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ITGB1BP1O14713 200 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 LIN7AO14910 233 aaPredicted RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 TOX3O15405 576 aaPredicted RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 COX7A2P2O60397 106 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 E2F6O75461 281 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ADAP1O75689 374 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CBR3O75828 277 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 BRI3O95415 125 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CXorf1O96002 111 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 IGKV5-2P06315 115 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 SNRPAP09012 282 aaKnown RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 DNAH10OSP0CZ25 163 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 SPNP16150 400 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 AKR1C4P17516 323 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ATF1P18846 271 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 PRTN3P24158 256 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ACTR1BP42025 376 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 LGALS7P47929 136 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 GCLMP48507 274 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 NUDT2P50583 147 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 PSMD7P51665 324 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CMC4P56277 68 aaPredicted RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 DYNLL1P63167 89 aaKnown RBP1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ATP5G2Q06055 141 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 BTN1A1Q13410 526 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 ZBTB6Q15916 424 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CCL15Q16663 113 aa1.49□□□□□ -2.17
GABPB1-209ENST00000559100 CEACAM16Q2WEN9 425 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms