RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FAM25GB3EWG6 89 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 IFNL4K9M1U5 179 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 WNT9BO14905 357 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 PRKACAP17612 351 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 EGR1P18146 543 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 GLRA1P23415 457 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 HOXA4Q00056 320 aaPredicted RBP15.21■□□□□ 0.03
CLPX-203ENST00000558958 ZNF787Q6DD87 383 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 EMG1Q92979 244 aaKnown RBP15.21■□□□□ 0.03
CLPX-203ENST00000558958 GAL3ST1Q99999 423 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 URM1Q9BTM9 101 aaKnown RBP15.21■□□□□ 0.03
CLPX-203ENST00000558958 LIME1Q9H400 295 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 DCAF16Q9NXF7 216 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 RASL12Q9NYN1 266 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 ST3GAL6Q9Y274 331 aa15.21■□□□□ 0.03
CLPX-203ENST00000558958 DYSFO75923 2080 aa15.21■□□□□ 0.02
CLPX-203ENST00000558958 METTL21EPA6NDL7 271 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 LRRC30A6NM36 301 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.2■□□□□ 0.02
CLPX-203ENST00000558958 CYB5R3P00387 301 aaPredicted RBP15.2■□□□□ 0.02
CLPX-203ENST00000558958 IRF2P14316 349 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 RBM11P57052 281 aaKnown RBP15.2■□□□□ 0.02
CLPX-203ENST00000558958 GMFBP60983 142 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
CLPX-203ENST00000558958 FAM189A2Q15884 450 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 PIGYQ3MUY2 71 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 CNIH2Q6PI25 160 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 ACP7Q6ZNF0 438 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 CCDC190Q86UF4 302 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 FAM89BQ8N5H3 189 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 CCL17Q92583 94 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 S100A16Q96FQ6 103 aaKnown RBP15.2■□□□□ 0.02
CLPX-203ENST00000558958 POM121Q96HA1 1249 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 DIRAS2Q96HU8 199 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 NICN1Q9BSH3 213 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 ATG5Q9H1Y0 275 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 TMEM106BQ9NUM4 274 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 IL36RNQ9UBH0 155 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 NPTNQ9Y639 398 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 USF3Q68DE3 2245 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 NBPF19A0A087WUL8 3843 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 A0A0A6YYD4 124 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 TMEM178BH3BS89 294 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 CPT2P23786 658 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 COL8A2P25067 703 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 LSAMPQ13449 338 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 SMIM21Q3B7S5 101 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 OR4M1Q8NGD0 313 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 NRGNQ92686 78 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 RDH5Q92781 318 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 YIPF5Q969M3 257 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 SEH1LQ96EE3 360 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 CXorf56Q9H5V9 222 aa15.2■□□□□ 0.02
CLPX-203ENST00000558958 RAB27BO00194 218 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 GEMIN2O14893 280 aaKnown RBP15.19■□□□□ 0.02
CLPX-203ENST00000558958 LY6HO94772 140 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 F12P00748 615 aaPredicted RBP15.19■□□□□ 0.02
CLPX-203ENST00000558958 CDK2P24941 298 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 PITPNBP48739 271 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 VEGFCP49767 419 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 EFNA4P52798 201 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 SNU13P55769 128 aaKnown RBP15.19■□□□□ 0.02
CLPX-203ENST00000558958 KRTAP10-9P60411 292 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 TAF9Q16594 264 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 HFEQ30201 348 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 MOGAT2Q3SYC2 334 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 FAM201AQ5SY85 155 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A1Q86YD7 464 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 C1orf87Q8N0U7 546 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 BOLLQ8N9W6 283 aaKnown RBP15.19■□□□□ 0.02
CLPX-203ENST00000558958 OR56B1Q8NGI3 324 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 DIABLOQ9NR28 239 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 DLL4Q9NR61 685 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 EXTL2Q9UBQ6 330 aa15.19■□□□□ 0.02
CLPX-203ENST00000558958 SPG11Q96JI7 2443 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 A0A0A6YYH2 397 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A10PA6NDY2 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A18PA6NE21 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A16PA6NEW6 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A20PA6NIJ5 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 A6NJ64 397 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A8PA6NJQ4 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A7PA6NKC0 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FOXI3A8MTJ6 420 aaPredicted RBP15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A22PA8MWA6 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A12PA8MX19 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A5PA8MXJ8 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A23PA8MXZ1 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 LYNX1G3V0Z9 82 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 NDUFS7O75251 213 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 RP2O75695 350 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 SCGNO76038 276 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 CHRM2P08172 466 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A15PP0C7V4 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A13PP0C7W8 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A14PP0C7W9 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 FAM90A24PP0C7X0 464 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 LYNX1P0DP58 116 aa15.18■□□□□ 0.02
CLPX-203ENST00000558958 DAOP14920 347 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms