RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 NR2C2APQ86WQ0 139 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 PNLDC1Q8NA58 520 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 GJC3Q8NFK1 279 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR10AD1Q8NGE0 317 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 PNRC2Q9NPJ4 139 aaKnown RBP13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 TMEM100Q9NV29 134 aa13.3□□□□□ -0.28
CDC42BPB-203ENST00000558867 OCM2P0CE71 109 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 FSTP19883 344 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 RBMXP38159 391 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 PSMD7P51665 324 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 METTL11BQ5VVY1 283 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR2T2Q6IF00 324 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 LINC01006Q8NI28 216 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 APOBEC3DQ96AK3 386 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 CEP19Q96LK0 163 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 TECTBQ96PL2 329 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 MIXL1Q9H2W2 232 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 DPAGT1Q9H3H5 408 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 ABRACLQ9P1F3 81 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 ATPIF1Q9UII2 106 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 ADAM30Q9UKF2 790 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR52A1Q9UKL2 312 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR6C6A6NF89 314 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 J3QRK9 145 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 APOC1P02654 83 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 OTX1P32242 354 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 CFHR2P36980 270 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 SCAND1P57086 179 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 LAX1Q8IWV1 398 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 CELF2-AS1Q8N7Q2 184 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 OR1F12Q8NHA8 337 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 HHLA2Q9UM44 414 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 V9GYH0 126 aa13.28□□□□□ -0.28
CDC42BPB-203ENST00000558867 TMEM269A0A1B0GVZ9 245 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 BTBD17A6NE02 478 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 RGS5O15539 181 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 GPR137BO60478 399 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 CD37P11049 281 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 OTPQ5XKR4 325 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 CORO6Q6QEF8 472 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 C1QL4Q86Z23 238 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 SCCPDHQ8NBX0 429 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 KCNJ15Q99712 375 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 SOSTQ9BQB4 213 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 ABCB9Q9NP78 766 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 CENPMQ9NSP4 180 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 FOXJ3Q9UPW0 622 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 FAM96BQ9Y3D0 163 aa13.27□□□□□ -0.29
CDC42BPB-203ENST00000558867 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 IQCF6A8MYZ5 107 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 F5H5P2 479 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 NDUFA2O43678 99 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 UPK1BO75841 260 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 CD2P06729 351 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 CSF1P09603 554 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 GATA4P43694 442 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 CAV3P56539 151 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 PROK1P58294 105 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 ECH1Q13011 328 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 BCL2L15Q5TBC7 163 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 HIST2H2BDQ6DRA6 164 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 LRRTM1Q86UE6 522 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 MINDY2Q8NBR6 621 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 CCDC54Q8NEL0 328 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 HDHD2Q9H0R4 259 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 RABL2AQ9UBK7 228 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 RABL2BQ9UNT1 228 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGHV1-69DA0A0B4J2H0 117 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGHV3-64DA0A0J9YX35 117 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 C3orf80F5H4A9 247 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 H0YL77 283 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 AIPO00170 330 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 RER1O15258 196 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 IGHV1-69P01742 117 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 TTRP02766 147 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 CCL1P22362 96 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 HSD11B1P28845 292 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CDC42BPB-203ENST00000558867 C11orf91Q3C1V1 193 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms