RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ELK4P28324 431 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 CMC4P56277 68 aaPredicted RBP2.52□□□□□ -2.01
CASC4-206ENST00000558847 BNIP2Q12982 314 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 LY6EQ16553 131 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 SP6Q3SY56 376 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 LRRC8AQ8IWT6 810 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 CYP4Z2PQ8N1L4 340 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 GAPTQ8N292 157 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 C17orf78Q8N4C9 275 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 SPICQ8N5J4 248 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 OR4K17Q8NGC6 315 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 ZNF420Q8TAQ5 688 aaPredicted RBP2.52□□□□□ -2.01
CASC4-206ENST00000558847 RMI2Q96E14 147 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 WDR34Q96EX3 536 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 YPEL4Q96NS1 127 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 PLEKHA1Q9HB21 404 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 RDH14Q9HBH5 336 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 TMBIM4Q9HC24 238 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 CLEC2DQ9UHP7 191 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 RWDD2AQ9UIY3 292 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 ZNF780BQ9Y6R6 833 aa2.52□□□□□ -2.01
CASC4-206ENST00000558847 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
CASC4-206ENST00000558847 SIGLEC1Q9BZZ2 1709 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 NRCAMQ92823 1304 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 IGHV3OR16-8A0A075B7F1 116 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 GOLGA8QA0A0J9YX86 632 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 F8VP50 259 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 MFNGO00587 321 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 CRXO43186 299 aaPredicted RBP2.51□□□□□ -2.01
CASC4-206ENST00000558847 LDOC1O95751 146 aaPredicted RBP2.51□□□□□ -2.01
CASC4-206ENST00000558847 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 PSMB9P28065 219 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 GTF2H1P32780 548 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 CCL23P55773 120 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 STX3Q13277 289 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ANGPT1Q15389 498 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 LINC00303Q3SY05 128 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ZNF404Q494X3 552 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 TTMPQ5BVD1 217 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 CLLU1OSQ5K130 101 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
CASC4-206ENST00000558847 ITPRIPQ8IWB1 547 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 STK40Q8N2I9 435 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ZNF561Q8N587 486 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 FAM57AQ8TBR7 257 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 C22orf15Q8WYQ4 148 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 TMIGD2Q96BF3 282 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 CPB2Q96IY4 423 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ATP6V1G3Q96LB4 118 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ZFP3Q96NJ6 502 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 PITX2Q99697 317 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 INIPQ9NRY2 104 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 TAC3Q9UHF0 121 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 NXT1Q9UKK6 140 aaKnown RBP2.51□□□□□ -2.01
CASC4-206ENST00000558847 SLC22A7Q9Y694 548 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 SCN1AP35498 2009 aa2.51□□□□□ -2.01
CASC4-206ENST00000558847 ELP1O95163 1332 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 IGKV1-6A0A0C4DH72 117 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 LOC389332A0A1B0GUA5 103 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 ERICH2A1L162 156 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 OR6C70A6NIJ9 312 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 A8MUU9 505 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 RNASEK-C17orf49H0YIS7 233 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 LGALS9O00182 355 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 RGS5O15539 181 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 IGLV3-19P01714 112 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 CECR9P0C854 216 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 PRTN3P24158 256 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 HLA-DMAP28067 261 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 IL12BP29460 328 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 LCN1P31025 176 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 TGM4P49221 684 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 ELF3P78545 371 aaPredicted RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 MEF2CQ06413 473 aaPredicted RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 ELOCQ15369 112 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 OR4D1Q15615 310 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 TRIP13Q15645 432 aaPredicted RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 CEACAM16Q2WEN9 425 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 BSXQ3C1V8 233 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 UBE2NLQ5JXB2 153 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 ZNF678Q5SXM1 525 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 FAM19A1Q7Z5A9 133 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 LRRC6Q86X45 466 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 ZDHHC22Q8N966 263 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 CDRT4Q8N9R6 151 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 BLNKQ8WV28 456 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 CATSPER2Q96P56 530 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 CYTH2Q99418 400 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 THTPAQ9BU02 230 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 CHMP4BQ9H444 224 aaKnown RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 TREM1Q9NP99 234 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 SLC22A14Q9Y267 594 aa2.5□□□□□ -2.01
CASC4-206ENST00000558847 BRCA1P38398 1863 aaKnown RBP2.5□□□□□ -2.01
CASC4-206ENST00000558847 TUBGCP6Q96RT7 1819 aa2.49□□□□□ -2.01
CASC4-206ENST00000558847 A0A1B0GTI1 187 aa2.49□□□□□ -2.01
CASC4-206ENST00000558847 ERICH4A6NGS2 130 aa2.49□□□□□ -2.01
CASC4-206ENST00000558847 COX7A2P2O60397 106 aa2.49□□□□□ -2.01
CASC4-206ENST00000558847 CXorf1O96002 111 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms