RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PGA5P0DJD9 388 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 FCGR1AP12314 374 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 FASP25445 335 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 DAPP51397 102 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 DLX1P56177 255 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 DEFA6Q01524 100 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 PRB3Q04118 309 aaPredicted RBP6.58□□□□□ -1.36
TRAF3-205ENST00000558700 SRSF4Q08170 494 aaKnown RBP6.58□□□□□ -1.36
TRAF3-205ENST00000558700 C2orf68Q2NKX9 166 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 TMEM42Q69YG0 159 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 C12orf73Q69YU5 71 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 Q6ZSV7 163 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 MEPCEQ7L2J0 689 aaKnown RBP6.58□□□□□ -1.36
TRAF3-205ENST00000558700 ELMOD2Q8IZ81 293 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 TCEANCQ8N8B7 351 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 OR51G2Q8NGK0 314 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 OR4C13Q8NGP0 309 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 FAM234AQ9H0X4 552 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 ADGRL4Q9HBW9 690 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 RAB18Q9NP72 206 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 GPR173Q9NS66 373 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 WARS2Q9UGM6 360 aaKnown RBP6.58□□□□□ -1.36
TRAF3-205ENST00000558700 OR52A1Q9UKL2 312 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 MAB21L2Q9Y586 359 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 SNX5Q9Y5X3 404 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 V9GYS6 101 aa6.58□□□□□ -1.36
TRAF3-205ENST00000558700 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RFPL4AA6NLU0 287 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RFPL4AL1F8VTS6 287 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 H3BUX3 64 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 SYNGR1O43759 233 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 MITFO75030 526 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 NOS1APO75052 506 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 MPZP25189 248 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 GABRA5P31644 462 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RASSF2P50749 326 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 ERVFRD-1P60508 538 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RPL31P62899 125 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 AANATQ16613 207 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 LRRC75BQ2VPJ9 315 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 PDLIM3Q53GG5 364 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 DMRTC1Q5HYR2 192 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 AADACL4Q5VUY2 407 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 KDM4DQ6B0I6 523 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 C11orf88Q6PI97 169 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 PLEKHG7Q6ZR37 379 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 ASRGL1Q7L266 308 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 FAM220AQ7Z4H9 259 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 BCDIN3DQ7Z5W3 292 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 PNKDQ8N490 385 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 CD177Q8N6Q3 437 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 YIPF7Q8N8F6 280 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 CCDC54Q8NEL0 328 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 ZNF488Q96MN9 340 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 IL4I1Q96RQ9 567 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 APOL4Q9BPW4 351 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RBM4BQ9BQ04 359 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 NRIP2Q9BQI9 281 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 CADM1Q9BY67 442 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 PKIBQ9C010 78 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 WDR12Q9GZL7 423 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 PPA2Q9H2U2 334 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 RANBP3Q9H6Z4 567 aaPredicted RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 HEXA-AS1Q9H8Q6 139 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 C19orf12Q9NSK7 152 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 USE1Q9NZ43 259 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 MRM2Q9UI43 246 aaKnown RBP6.57□□□□□ -1.36
TRAF3-205ENST00000558700 SLC7A11Q9UPY5 501 aa6.57□□□□□ -1.36
TRAF3-205ENST00000558700 A0A1B0GTI1 187 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 H3BUI4 141 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 SYT7O43581 403 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 GATBO75879 557 aaKnown RBP6.56□□□□□ -1.36
TRAF3-205ENST00000558700 MPIG6BO95866 241 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 TK1P04183 234 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 CCL1P22362 96 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 COX7A1P24310 79 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 HTR1FP30939 366 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 PRDX2P32119 198 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 GDNFP39905 211 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 CEBPDP49716 269 aaPredicted RBP6.56□□□□□ -1.36
TRAF3-205ENST00000558700 KRTAP10-3P60369 221 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 BNIP1Q12981 228 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 IL24Q13007 206 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 C1orf146Q5VVC0 180 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 ASPHD2Q6ICH7 369 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 HCP5Q6MZN7 132 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 Q6ZSR3 168 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 MKXQ8IYA7 352 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 DTX3Q8N9I9 347 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 ASCC1Q8N9N2 400 aaKnown RBP6.56□□□□□ -1.36
TRAF3-205ENST00000558700 OR14K1Q8NGZ2 314 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 OR2T6Q8NHC8 308 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 TBX5Q99593 518 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 CIB1Q99828 191 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 SSX3Q99909 188 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 NPFFR1Q9GZQ6 430 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 CHST5Q9GZS9 411 aa6.56□□□□□ -1.36
TRAF3-205ENST00000558700 HES4Q9HCC6 221 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms