RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MAGEB3O15480 346 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 PRDX2P32119 198 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 NPBWR2P48146 333 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 FGF12P61328 243 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 PPP3R1P63098 170 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 PAX8Q06710 450 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 Q499Y3 187 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 YIF1BQ5BJH7 314 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 RBM48Q5RL73 367 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 PNLDC1Q8NA58 520 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 DACT3Q96B18 629 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 GPER1Q99527 375 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 DUSP21Q9H596 190 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 RBFOX1Q9NWB1 397 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 IL36RNQ9UBH0 155 aa13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-206ENST00000558649 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 TRBV5-5A0A0J9YX44 114 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 KNG1P01042 644 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 PRKACAP17612 351 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 EPHA1P21709 976 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 MAP2K4P45985 399 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 RPS11P62280 158 aaKnown RBP eCLIP13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 IRF3Q14653 427 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 SPHARQ15513 63 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 KISS1Q15726 138 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 ASPHD2Q6ICH7 369 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 PCGF1Q9BSM1 259 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 FAM192AQ9GZU8 254 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 CKLFQ9UBR5 152 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 RPUSD1Q9UJJ7 312 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 BLOC1S6Q9UL45 172 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
RABGGTA-206ENST00000558649 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 SFTPBP07988 381 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 ARF6P62330 175 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 BDH1Q02338 343 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 COL10A1Q03692 680 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 Q8IYB0 196 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 OR52N4Q8NGI2 321 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 CPNE2Q96FN4 548 aaPredicted RBP13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 SDSLQ96GA7 329 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
RABGGTA-206ENST00000558649 IGKV1-12A0A0C4DH73 117 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 TOX4O94842 621 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 ALX3O95076 343 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 IGKV1D-12P01611 117 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 PPIAL4GP0DN37 164 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 DUSP1P28562 367 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 SCGB2A2Q13296 93 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 METTL11BQ5VVY1 283 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 FAM185AQ8N0U4 392 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 TNFAIP8L1Q8WVP5 186 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
RABGGTA-206ENST00000558649 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 CUBNO60494 3623 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 TRAV8-7A0A075B6U6 113 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 MAGEA13PA6NCF6 341 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 GABRPO00591 440 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 GPR37O15354 613 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 DENRO43583 198 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 HAND1O96004 215 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 FSHBP01225 129 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 LIPFP07098 398 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 IGHV4-38-2P0DP08 117 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 BDKRB2P30411 391 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 OR3A4PP47883 348 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 CAV3P56539 151 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 ZP1P60852 638 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 INSL4Q14641 139 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 BPIFB2Q8N4F0 458 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 OR4M1Q8NGD0 313 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 UFD1Q92890 307 aa13.09□□□□□ -0.31
RABGGTA-206ENST00000558649 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms