RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 VENTXO95231 258 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 PSG2P11465 335 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
LINC01220-201ENST00000558575 FSTP19883 344 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 POU3F4P49335 361 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
LINC01220-201ENST00000558575 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 TMIGD2Q96BF3 282 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 C12orf43Q96C57 262 aaKnown RBP12.88□□□□□ -0.35
LINC01220-201ENST00000558575 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
LINC01220-201ENST00000558575 RASL12Q9NYN1 266 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 NLKQ9UBE8 527 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 POLDIP2Q9Y2S7 368 aa12.88□□□□□ -0.35
LINC01220-201ENST00000558575 OR2AT4A6NND4 320 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 NDUFA2O43678 99 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 MSMBP08118 114 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 HCKP08631 526 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 SELLP14151 372 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 BCL3P20749 454 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 CPT2P23786 658 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 BDKRB2P30411 391 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 LCN2P80188 198 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 FABP5Q01469 135 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 PAX2Q02962 417 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
LINC01220-201ENST00000558575 ASCL4Q6XD76 172 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 ZNF788Q6ZQV5 615 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 CEACAM19Q7Z692 300 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 CD177Q8N6Q3 437 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 OR51F2Q8NH61 342 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 CEP19Q96LK0 163 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 ZNF696Q9H7X3 374 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 SMURF1Q9HCE7 757 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 FOXJ3Q9UPW0 622 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
LINC01220-201ENST00000558575 MAB21L2Q9Y586 359 aa12.87□□□□□ -0.35
LINC01220-201ENST00000558575 WNK2Q9Y3S1 2297 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 RFPL4AA6NLU0 287 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 A8MXK9 166 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 RFPL4AL1F8VTS6 287 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 GABRPO00591 440 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 NXPH2O95156 264 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 SFTPBP07988 381 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 UCHL1P09936 223 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 OCMP0CE72 109 aaPredicted RBP12.86□□□□□ -0.35
LINC01220-201ENST00000558575 CALCBP10092 127 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 ADRA2CP18825 462 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 PITPNBP48739 271 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 KCNJ8Q15842 424 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 PRR31Q5SQ13 230 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 SYT6Q5T7P8 510 aaPredicted RBP12.86□□□□□ -0.35
LINC01220-201ENST00000558575 LRRTM1Q86UE6 522 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 SATL1Q86VE3 508 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 MKXQ8IYA7 352 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 OR8B3Q8NGG8 313 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
LINC01220-201ENST00000558575 TMEM186Q96B77 213 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 GAFA1Q96PS6 74 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 OR8B2Q96RD0 313 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 RBFOX1Q9NWB1 397 aaKnown RBP12.86□□□□□ -0.35
LINC01220-201ENST00000558575 HIF1ANQ9NWT6 349 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
LINC01220-201ENST00000558575 DVL1O14640 695 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 TMPRSS2O15393 492 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 FOXH1O75593 365 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 KDM4BO94953 1096 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 MAS1P04201 325 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 CD37P11049 281 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 PSMB9P28065 219 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 GABRA5P31644 462 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 PRDX2P32119 198 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 OR3A4PP47883 348 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
LINC01220-201ENST00000558575 DVL1P1P54792 670 aaPredicted RBP12.85□□□□□ -0.35
LINC01220-201ENST00000558575 PPP3R1P63098 170 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 DGUOKQ16854 277 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 ZSCAN4Q8NAM6 433 aaPredicted RBP12.85□□□□□ -0.35
LINC01220-201ENST00000558575 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 FCGR1BQ92637 280 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 SDSLQ96GA7 329 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 SSBP3Q9BWW4 388 aaPredicted RBP12.85□□□□□ -0.35
LINC01220-201ENST00000558575 DNTTIP1Q9H147 329 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 NEK6Q9HC98 313 aa12.85□□□□□ -0.35
LINC01220-201ENST00000558575 NDUFB11Q9NX14 153 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms