RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ARRDC5A6NEK1 342 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ACOD1A6NK06 481 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 TOR1AO14656 332 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 JTBO76095 146 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 DIRAS1O95057 198 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 NRASP01111 189 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 IFNGP01579 166 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 GYPBP06028 91 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SNRNP70P08621 437 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 PSKH1P11801 424 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ATP6V1B1P15313 513 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SPI1P17947 270 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 OPRL1P41146 370 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 HAAOP46952 286 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 NUDT2P50583 147 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 INSL3P51460 131 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 LUMP51884 338 aaPredicted RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 PRRX1P54821 245 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 BDH1Q02338 343 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 RIPPLY1Q0D2K3 151 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 KLF10Q13118 480 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SNAPC1Q16533 368 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ZNF260Q3ZCT1 412 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SAMD4BQ5PRF9 694 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 ZNF684Q5T5D7 378 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 FAM27D1Q5T7N8 215 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 LCN1P1Q5VSP4 162 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 PLCXD3Q63HM9 321 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 TEX38Q6PEX7 206 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 LCNL1Q6ZST4 164 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 THNSL2Q86YJ6 484 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ERI1Q8IV48 349 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 FOXRED2Q8IWF2 684 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SLC15A3Q8IY34 581 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ABHD12Q8N2K0 398 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 LINC00471Q8N535 108 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ASCC1Q8N9N2 400 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 SLC37A3Q8NCC5 494 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 OR6N2Q8NGY6 317 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 OR8U1Q8NH10 309 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 THEM6Q8WUY1 208 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 RAX2Q96IS3 184 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 C7orf34Q96L11 122 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SNX22Q96L94 193 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 ZNF488Q96MN9 340 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 INTS14Q96SY0 518 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 FUZQ9BT04 418 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 GON7Q9BXV9 100 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 DCLRE1BQ9H816 532 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 DCAF13Q9NV06 445 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 INTS9Q9NV88 658 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 IL20Q9NYY1 176 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 RAB21Q9UL25 225 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPG11-208ENST00000558155 HHLA2Q9UM44 414 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SAMD4AQ9UPU9 718 aaKnown RBP4.09□□□□□ -1.75
SPG11-208ENST00000558155 BAIAP2Q9UQB8 552 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 SLC22A13Q9Y226 551 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 MOB4Q9Y3A3 225 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 HSPE1-MOB4S4R3N1 261 aa4.09□□□□□ -1.75
SPG11-208ENST00000558155 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 OOSP1A8MZH6 123 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 J3QT63 122 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PSMD9O00233 223 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PAX4O43316 350 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 LYNP07948 512 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PEX2P28328 305 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 GSTT1P30711 240 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 RRM2P31350 389 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 CRMP1Q14194 572 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PNLIPRP3Q17RR3 467 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 CXorf66Q5JRM2 361 aaPredicted RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 SLX4IPQ5VYV7 408 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 GLYATQ6IB77 296 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 ADAMTSL5Q6ZMM2 481 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 OVCH2Q7RTZ1 564 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 SLC35E3Q7Z769 313 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 TRAPPC6BQ86SZ2 158 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 OR8H2Q8N162 312 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 DRAM1Q8N682 238 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 OR8B12Q8NGG6 310 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 OR4P4Q8NGL7 312 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 OR4Q3Q8NH05 313 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 TRMT10AQ8TBZ6 339 aaKnown RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 MCUR1Q96AQ8 359 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 ISOC1Q96CN7 298 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 RNFT2Q96EX2 444 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 NOL4LQ96MY1 436 aaPredicted RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 DUX3Q96PT4 197 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 KCTD14Q9BQ13 255 aaPredicted RBP4.08□□□□□ -1.76
SPG11-208ENST00000558155 TSSK6Q9BXA6 273 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 NMNAT2Q9BZQ4 307 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 CCDC134Q9H6E4 229 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 EGLN3Q9H6Z9 239 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 EFCAB1Q9HAE3 211 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 HES4Q9HCC6 221 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 SAR1AQ9NR31 198 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 PCDHB16Q9NRJ7 776 aa4.08□□□□□ -1.76
SPG11-208ENST00000558155 ENPP5Q9UJA9 477 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms