RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 CEACAM19Q7Z692 300 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 TNFAIP8L1Q8WVP5 186 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
USP3-205ENST00000557884 HES4Q9HCC6 221 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 TMEM138Q9NPI0 162 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 ZNF222Q9UK12 451 aa11.92□□□□□ -0.5
USP3-205ENST00000557884 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 A0A0G2JMP0 313 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 A0A0X1KG70 313 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 C22orf46C9J442 243 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 GABRPO00591 440 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 NDUFB3O43676 98 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 MAS1P04201 325 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 ACAA1P09110 424 aaPredicted RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 FSTP19883 344 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 PCMT1P22061 227 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 MAPK3P27361 379 aaPredicted RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 PRDX2P32119 198 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 IL13RA1P78552 427 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 SSX1Q16384 188 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 DGUOKQ16854 277 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 ATPAF1Q5TC12 328 aaPredicted RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 UNQ9370/PRO34162Q6UXP9 181 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 PHC2Q8IXK0 858 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 CD177Q8N6Q3 437 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 OR4M2Q8NGB6 313 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 CPNE2Q96FN4 548 aaPredicted RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 PPIL3Q9H2H8 161 aaKnown RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
USP3-205ENST00000557884 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
USP3-205ENST00000557884 SIGLEC5O15389 551 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 GPX5O75715 221 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 KNG1P01042 644 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 ALDOBP05062 364 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 SFTPBP07988 381 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 PRKACAP17612 351 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 DUSP1P28562 367 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
USP3-205ENST00000557884 OR3A4PP47883 348 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 NPY4RP50391 375 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 CAPZA1P52907 286 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 GP2P55259 537 aaKnown RBP11.9□□□□□ -0.5
USP3-205ENST00000557884 NEDD8Q15843 81 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 LRRC10Q5BKY1 277 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.9□□□□□ -0.51e-7■■■■□ 20.2
USP3-205ENST00000557884 TMEM91Q6ZNR0 172 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 C1QL2Q7Z5L3 287 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 Q8IYB0 196 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.5
USP3-205ENST00000557884 ZNRF1Q8ND25 227 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 TMEM185AQ8NFB2 350 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 OR10K1Q8NGX5 313 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 THRSPQ92748 146 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 FOXJ3Q9UPW0 622 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
USP3-205ENST00000557884 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
USP3-205ENST00000557884 IGHV2-70DA0A0C4DH43 119 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 RGS9O75916 674 aaPredicted RBP11.89□□□□□ -0.51
USP3-205ENST00000557884 KDM4BO94953 1096 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 CDRT1O95170 752 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 NDUFB7P17568 137 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 GABRA5P31644 462 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 FABP5Q01469 135 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 PAX2Q02962 417 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 BTN2A1Q7KYR7 527 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 SAXO1Q8IYX7 474 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 JAGN1Q8N5M9 183 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 RAB40AQ8WXH6 277 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 H1FXQ92522 213 aaKnown RBP11.89□□□□□ -0.51
USP3-205ENST00000557884 SDSLQ96GA7 329 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 MED30Q96HR3 178 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
USP3-205ENST00000557884 BEX2Q9BXY8 128 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 TMPRSS13Q9BYE2 586 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 TCF7L1Q9HCS4 588 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
USP3-205ENST00000557884 ING4Q9UNL4 249 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 POLR3KQ9Y2Y1 108 aaPredicted RBP11.89□□□□□ -0.51
USP3-205ENST00000557884 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
USP3-205ENST00000557884 PPIAL4CA0A0B4J2A2 164 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 CRLF1O75462 422 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 SC5DO75845 299 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 AVPP01185 164 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 UCHL1P09936 223 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 ADRA2CP18825 462 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 HNF1AP20823 631 aa11.88□□□□□ -0.51
USP3-205ENST00000557884 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms