RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 HES5Q5TA89 166 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 ASCL4Q6XD76 172 aa12.77□□□□□ -0.36
NEDD1-213ENST00000557644 EMG1Q92979 244 aaKnown RBP12.77□□□□□ -0.36
NEDD1-213ENST00000557644 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.36
NEDD1-213ENST00000557644 C1orf147Q96MC9 270 aaPredicted RBP12.77□□□□□ -0.36
NEDD1-213ENST00000557644 A0A1B0GW55 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 OR2AT4A6NND4 320 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 CEACAM18A8MTB9 384 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 PDCD5O14737 125 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 PSG2P11465 335 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-213ENST00000557644 PRKACAP17612 351 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 AMY2BP19961 511 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 SERPINA2P20848 420 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 USF1P22415 310 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-213ENST00000557644 HTR2CP28335 458 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 P2RY14Q15391 338 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 SMIM21Q3B7S5 101 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
NEDD1-213ENST00000557644 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
NEDD1-213ENST00000557644 IGKV1D-17A0A075B6S4 117 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 RFPL4AA6NLU0 287 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 RFPL4AL1F8VTS6 287 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 SLC22A1O15245 554 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 STUMQ69YW2 141 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 METAP1DQ6UB28 335 aaPredicted RBP12.76□□□□□ -0.37
NEDD1-213ENST00000557644 ANGPTL6Q8NI99 470 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 S100A13Q99584 98 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 CCL13Q99616 98 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 A0A0B4J203 849 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 H7C1Q1 480 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 SLC17A2O00624 439 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 TNFRSF13BO14836 293 aaPredicted RBP12.76□□□□□ -0.37
NEDD1-213ENST00000557644 HTR3BO95264 441 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 FSTL3O95633 263 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
NEDD1-213ENST00000557644 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
NEDD1-213ENST00000557644 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 Q8IYB0 196 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 MUC20Q8N307 709 aaPredicted RBP12.76□□□□□ -0.37
NEDD1-213ENST00000557644 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
NEDD1-213ENST00000557644 IFITM5A6NNB3 132 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 SELLP14151 372 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 GABRA2P47869 451 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 SEC61A1P61619 476 aaKnown RBP12.75□□□□□ -0.37
NEDD1-213ENST00000557644 LMO4P61968 165 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 BLMHQ13867 455 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 PDCD1Q15116 288 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 CD177Q8N6Q3 437 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 TMEM104Q8NE00 496 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 TBC1D15Q8TC07 691 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 C12orf43Q96C57 262 aaKnown RBP12.75□□□□□ -0.37
NEDD1-213ENST00000557644 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 PCDHB10Q9UN67 800 aa12.75□□□□□ -0.37
NEDD1-213ENST00000557644 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
NEDD1-213ENST00000557644 TMPRSS2O15393 492 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 SERPINB10P48595 397 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 PSMD7P51665 324 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 RAB11BQ15907 218 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 DCDC5Q6ZRR9 648 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 FAM216BQ8N7L0 139 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 NDNFQ8TB73 568 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 BANF2Q9H503 90 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 IL36GQ9NZH8 169 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF222Q9UK12 451 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 NOTOA8MTQ0 251 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 ADAM20O43506 726 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 FCN3O75636 299 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 IGHV2-5P01817 119 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 CSTBP04080 98 aaKnown RBP12.74□□□□□ -0.37
NEDD1-213ENST00000557644 RPS2P15880 293 aaKnown RBP12.74□□□□□ -0.37
NEDD1-213ENST00000557644 FGF12P61328 243 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 DGUOKQ16854 277 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 ELP2Q6IA86 826 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 FGFRL1Q8N441 504 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 OR51D1Q8NGF3 324 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF665Q9H7R5 613 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 STEAP1Q9UHE8 339 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms