RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 C3orf56Q8N813 242 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 OR13C9Q8NGT0 318 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 RPS4Y2Q8TD47 263 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 RGP1Q92546 391 aaPredicted RBP18.57■□□□□ 0.56
PABPN1-207ENST00000556821 TNFRSF14Q92956 283 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 SPSB1Q96BD6 273 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 OPALINQ96PE5 141 aa18.57■□□□□ 0.56
PABPN1-207ENST00000556821 A0A0G2JK05 382 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 A0A1W2PQ09 198 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 HOXA3O43365 443 aaPredicted RBP18.56■□□□□ 0.56
PABPN1-207ENST00000556821 INMTO95050 263 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 PRKACBP22694 351 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 CAPGP40121 348 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 POU3F4P49335 361 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 CAPZA1P52907 286 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 GBX2P52951 348 aaPredicted RBP18.56■□□□□ 0.56
PABPN1-207ENST00000556821 MTCP1P56278 107 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 KLRD1Q13241 179 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 OR5AK2Q8NH90 309 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 GCDHQ92947 438 aaPredicted RBP18.56■□□□□ 0.56
PABPN1-207ENST00000556821 IL36RNQ9UBH0 155 aa18.56■□□□□ 0.56
PABPN1-207ENST00000556821 NKX1-2Q9UD57 310 aaPredicted RBP18.56■□□□□ 0.56
PABPN1-207ENST00000556821 DIMT1Q9UNQ2 313 aaKnown RBP18.56■□□□□ 0.56
PABPN1-207ENST00000556821 H0YAE9 185 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 M0R1W7 72 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 ZNF737O75373 536 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 CCDC159P0C7I6 412 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 NPBWR2P48146 333 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 Q6YL49 198 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 C1orf122Q6ZSJ8 110 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 LHFPL2Q6ZUX7 228 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 FAM185AQ8N0U4 392 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 SPACA5Q96QH8 159 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 COMMD4Q9H0A8 199 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 DCLRE1BQ9H816 532 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 UNKLQ9H9P5 680 aaKnown RBP18.55■□□□□ 0.56
PABPN1-207ENST00000556821 RBFOX1Q9NWB1 397 aaKnown RBP18.55■□□□□ 0.56
PABPN1-207ENST00000556821 CAB39Q9Y376 341 aaPredicted RBP18.55■□□□□ 0.56
PABPN1-207ENST00000556821 HSPE1-MOB4S4R3N1 261 aa18.55■□□□□ 0.56
PABPN1-207ENST00000556821 TRBV2A0A0J9YWF9 115 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 A0A0U1RQK1 487 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 IRGMA1A4Y4 181 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 LALBAP00709 142 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 MT-ND2P03891 347 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 TK1P04183 234 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 MELTFP08582 738 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 BCL3P20749 454 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 COL10A1Q03692 680 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 GABPB1Q06547 395 aaPredicted RBP18.54■□□□□ 0.56
PABPN1-207ENST00000556821 CDK5R1Q15078 307 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 ASPHD2Q6ICH7 369 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 PARP16Q8N5Y8 322 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 HAVCR2Q8TDQ0 301 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 FBLIM1Q8WUP2 373 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 EMG1Q92979 244 aaKnown RBP18.54■□□□□ 0.56
PABPN1-207ENST00000556821 ZDHHC16Q969W1 377 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 SLC25A28Q96A46 364 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 RFT1Q96AA3 541 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 FAM234AQ9H0X4 552 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 ZCCHC4Q9H5U6 513 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 NOX4Q9NPH5 578 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 CLEC2DQ9UHP7 191 aa18.54■□□□□ 0.56
PABPN1-207ENST00000556821 SIRT4Q9Y6E7 314 aaPredicted RBP18.54■□□□□ 0.56
PABPN1-207ENST00000556821 IGKV1-12A0A0C4DH73 117 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 K7N7A8 449 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 IGKV1D-12P01611 117 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 HKR1P10072 659 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 PDZK1IP1Q13113 114 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 HCP5Q6MZN7 132 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 C8orf59Q8N0T1 100 aaPredicted RBP18.53■□□□□ 0.56
PABPN1-207ENST00000556821 GGHQ92820 318 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 METTL8Q9H825 291 aaKnown RBP18.53■□□□□ 0.56
PABPN1-207ENST00000556821 PKD1L1Q8TDX9 2849 aa18.53■□□□□ 0.56
PABPN1-207ENST00000556821 ANGPTL7O43827 346 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 ALX3O95076 343 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 RPL31P62899 125 aaKnown RBP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 GUCA2AQ02747 115 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 ZNF273Q14593 569 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 CCDC58Q4VC31 144 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 RPL22L1Q6P5R6 122 aaKnown RBP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 MKXQ8IYA7 352 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 Q8IYB0 196 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 PNKDQ8N490 385 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 C11orf42Q8N5U0 333 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 ASCC1Q8N9N2 400 aaKnown RBP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 ZNF485Q8NCK3 441 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 OR4M1Q8NGD0 313 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 OR5D18Q8NGL1 313 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 TSEN15Q8WW01 171 aaKnown RBP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 TAF15Q92804 592 aaKnown RBP eCLIP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 ZNF696Q9H7X3 374 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 DHDHQ9UQ10 334 aa18.52■□□□□ 0.56
PABPN1-207ENST00000556821 EXOSC1Q9Y3B2 195 aaKnown RBP18.52■□□□□ 0.56
PABPN1-207ENST00000556821 TRRAPQ9Y4A5 3859 aa18.51■□□□□ 0.55
PABPN1-207ENST00000556821 TMEM82A0PJX8 343 aa18.51■□□□□ 0.55
PABPN1-207ENST00000556821 XPNPEP2O43895 674 aa18.51■□□□□ 0.55
PABPN1-207ENST00000556821 CHRM2P08172 466 aa18.51■□□□□ 0.55
PABPN1-207ENST00000556821 RPSAP08865 295 aaKnown RBP18.51■□□□□ 0.55
PABPN1-207ENST00000556821 MYL12AP19105 171 aa18.51■□□□□ 0.55
PABPN1-207ENST00000556821 DEFA6Q01524 100 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms