RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 VCXQ9H320 206 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 DCLRE1BQ9H816 532 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 NIPAL2Q9H841 368 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 MARCH7Q9H992 704 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 ADGRL4Q9HBW9 690 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 C1orf123Q9NWV4 160 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 SMPD3Q9NY59 655 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-243ENST00000556671 USE1Q9NZ43 259 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 ATPIF1Q9UII2 106 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-243ENST00000556671 COPS3Q9UNS2 423 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 PIGLQ9Y2B2 252 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 NAV3Q8IVL0 2385 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 CSMD2Q7Z408 3487 aa3.91□□□□□ -1.78
ATXN3-243ENST00000556671 TLN2Q9Y4G6 2542 aa3.9□□□□□ -1.78
ATXN3-243ENST00000556671 PPIAL4EA0A075B759 164 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 IGHV3OR15-7A0A075B7D8 119 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 A0A1B0GVI7 797 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FAM230AA0A1W2PPH8 454 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 VGLL3A8MV65 326 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PPIAL4DF5H284 164 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 H3BSA7 217 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MLNRO43193 412 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MPZL2O60487 215 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 GMDSO60547 372 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 LMX1BO60663 402 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ZNF254O75437 659 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MTRF1O75570 445 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 HTR1AP08908 422 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CSF1P09603 554 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PPIAL4FP0DN26 164 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 IGHV4-31P0DP07 118 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ANOS1P23352 680 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CFL1P23528 166 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 GIFP27352 417 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 HOXD3P31249 432 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SRP14P37108 136 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 DDOSTP39656 456 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OPRL1P41146 370 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SNRPGP62308 76 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 LCN2P80188 198 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 EFNB1P98172 346 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FAM3AP98173 230 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 RIPPLY1Q0D2K3 151 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PRDX4Q13162 271 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MPPED2Q15777 294 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PCK2Q16822 640 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FAM201AQ5SY85 155 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 TTC23Q5W5X9 447 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FAM166AQ6J272 317 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ZNF826PQ6ZT77 177 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SSX6Q7RTT6 188 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 C1orf87Q8N0U7 546 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CADM3Q8N126 398 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FTMTQ8N4E7 242 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 RFLNBQ8N5W9 214 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CSNK2A3Q8NEV1 391 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OR5T2Q8NGG2 359 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OR8B12Q8NGG6 310 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CLDND2Q8NHS1 167 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CNIH3Q8TBE1 160 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 TRMT10AQ8TBZ6 339 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 NPRL2Q8WTW4 380 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MRPL48Q96GC5 212 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OR8B4Q96RC9 309 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 MICU1Q9BPX6 476 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SLC30A2Q9BRI3 323 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ADAT1Q9BUB4 502 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SHARPINQ9H0F6 387 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 METTL17Q9H7H0 456 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PPP1R3EQ9H7J1 279 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 FN3KRPQ9HA64 309 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 GPR84Q9NQS5 396 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 CHCHD3Q9NX63 227 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 DCAF16Q9NXF7 216 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 ZNF319Q9P2F9 582 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OR52A1Q9UKL2 312 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 HSF4Q9ULV5 492 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SLC22A13Q9Y226 551 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 RHBDD3Q9Y3P4 386 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 RPL36Q9Y3U8 105 aaKnown RBP3.9□□□□□ -1.79
ATXN3-243ENST00000556671 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 PCDHGB1Q9Y5G3 927 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 SNX5Q9Y5X3 404 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 NPTNQ9Y639 398 aa3.9□□□□□ -1.79
ATXN3-243ENST00000556671 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
ATXN3-243ENST00000556671 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
ATXN3-243ENST00000556671 PRR32B1ATL7 298 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms