RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TAS2R19P59542 299 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MEF2BQ02080 365 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 OC90Q02509 493 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 HIST1H1AQ02539 215 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 PIGFQ07326 219 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 NFATC4Q14934 902 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 PCOLCEQ15113 449 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MRPL23Q16540 153 aaKnown RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 TBR1Q16650 682 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 NRN1LQ496H8 165 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 CXorf66Q5JRM2 361 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 FAM69BQ5VUD6 431 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 TXNRD3NBQ6F5E7 133 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MRPL54Q6P161 138 aaKnown RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 ARL9Q6T311 187 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 C19orf35Q6ZS72 473 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 FBXO16Q8IX29 292 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 ZNF440Q8IYI8 595 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 ZADH2Q8N4Q0 377 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 EID2Q8N6I1 236 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 COX18Q8N8Q8 333 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 RELL2Q8NC24 303 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 OR2G3Q8NGZ4 309 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 OR4C3Q8NH37 302 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 GPR148Q8TDV2 347 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MUCL1Q96DR8 90 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 UHRF2Q96PU4 802 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 OR4K3Q96R72 315 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 OR6C1Q96RD1 312 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 CDX2Q99626 313 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 GPR22Q99680 433 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 ANAPC13Q9BS18 74 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 NDFIP1Q9BT67 221 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 GPR174Q9BXC1 333 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 SPANXDQ9BXN6 97 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 BABAM1Q9NWV8 329 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 ALKBH4Q9NXW9 302 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 TAS2R5Q9NYW4 299 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 CCDC167Q9P0B6 97 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 PSORS1C1Q9UIG5 152 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 ZNF107Q9UII5 783 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 B9D1Q9UPM9 204 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 RFNGQ9Y644 331 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 LTBP4Q8N2S1 1624 aa5.4□□□□□ -1.55
TDP1-215ENST00000556498 PHRF1Q9P1Y6 1649 aaKnown RBP5.4□□□□□ -1.55
TDP1-215ENST00000556498 A0A087WUU8 490 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 A0A0D9SFI3 127 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TRBV4-1A0A0J9YWV2 114 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 CENPVL3A0A0U1RRI6 287 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 A0A1B0GX51 115 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 hADV38S2A0JD32 116 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZNF705FA8MVS1 300 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 B5MCH6 92 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 F5H5P2 479 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FCN3O75636 299 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 CLDN1O95832 211 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 C1RP00736 705 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 IGLC1P0CG04 106 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZNF705DP0CH99 300 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZNF705BP0CI00 300 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 AKAIN1P0CW23 69 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FGF3P11487 239 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 BCKDHAP12694 445 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 HIST1H1DP16402 221 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 IGFBP2P18065 325 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TCN2P20062 427 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 OR1D4P47884 311 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 SELENOPP49908 381 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 LHX2P50458 406 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 GALCP54803 685 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TMPRSS3P57727 454 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TAS2R31P59538 309 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 RPL27P61353 136 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 RPS25P62851 125 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 RPL8P62917 257 aaKnown RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 BCL2L1Q07817 233 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 MAD2L1BPQ15013 274 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 PDGFRLQ15198 375 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 MMDQ15546 238 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 OR8B8Q15620 311 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ACOT6Q3I5F7 207 aaPredicted RBP5.39□□□□□ -1.55
TDP1-215ENST00000556498 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 C1orf189Q5VU69 101 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 CNIH2Q6PI25 160 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 OPN5Q6U736 354 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FAM159AQ6UWV7 190 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TMEM184AQ6ZMB5 413 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 SIGLEC15Q6ZMC9 328 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZNF730Q6ZMV8 503 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 FOXI2Q6ZQN5 318 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 CLEC20AQ6ZU45 233 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 TMPRSS11BQ86T26 416 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 MARCH9Q86YJ5 346 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 APRG1Q8IVJ8 170 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 KRTCAP2Q8N6L1 136 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 ZNF485Q8NCK3 441 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 NOXO1Q8NFA2 376 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 OR1B1Q8NGR6 318 aa5.39□□□□□ -1.55
TDP1-215ENST00000556498 HMGCLL1Q8TB92 370 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms