RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 EGFL6Q8IUX8 553 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 CCDC54Q8NEL0 328 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 OR8J1Q8NGP2 316 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 OR13D1Q8NGV5 346 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 NPFFR1Q9GZQ6 430 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 FOXJ3Q9UPW0 622 aa18.31■□□□□ 0.52
ACTN1-220ENST00000556433 FAM90A8PA6NJQ4 464 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 CHST1O43916 411 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 ZNF737O75373 536 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 ARG1P05089 322 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 ZNF728P0DKX0 622 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 PLA1AQ53H76 456 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 LIAT1Q6ZQX7 453 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 PRSS35Q8N3Z0 413 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 KLHDC1Q8N7A1 406 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 C11orf44Q8N8P7 122 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 DTX3Q8N9I9 347 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 EME1Q96AY2 570 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 BORCS8Q96FH0 119 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 NKX3-1Q99801 234 aaPredicted RBP18.3■□□□□ 0.52
ACTN1-220ENST00000556433 CHST5Q9GZS9 411 aa18.3■□□□□ 0.52
ACTN1-220ENST00000556433 TGP01266 2768 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 ATP5HO75947 161 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 RAB13P51153 203 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 TMED1Q13445 227 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 HIST2H2BDQ6DRA6 164 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 RDH10Q8IZV5 341 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 DYNAPQ8N1N2 210 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 RFKQ969G6 155 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 CENPNQ96H22 339 aaPredicted RBP18.29■□□□□ 0.52
ACTN1-220ENST00000556433 SNX22Q96L94 193 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 GABARAPL3Q9BY60 117 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 GNG8Q9UK08 70 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 OAZ3Q9UMX2 235 aa18.29■□□□□ 0.52
ACTN1-220ENST00000556433 TMEM82A0PJX8 343 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 VGLL3A8MV65 326 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 ZNF85Q03923 595 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 FAM189A2Q15884 450 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 TP53I3Q53FA7 332 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 FAM220AQ7Z4H9 259 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 OR8H2Q8N162 312 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 EMG1Q92979 244 aaKnown RBP18.28■□□□□ 0.52
ACTN1-220ENST00000556433 C10orf35Q96D05 121 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 MALSU1Q96EH3 234 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 ABCB10Q9NRK6 738 aa18.28■□□□□ 0.52
ACTN1-220ENST00000556433 TBL2Q9Y4P3 447 aaKnown RBP18.28■□□□□ 0.52
ACTN1-220ENST00000556433 TET2Q6N021 2002 aaPredicted RBP18.28■□□□□ 0.52
ACTN1-220ENST00000556433 LOC107986453A0A1B0GWG9 222 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 MEGF11A6BM72 1044 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 SAC3D1A6NKF1 404 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 RBP4P02753 201 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 UBCP0CG48 685 aaKnown RBP18.27■□□□□ 0.52
ACTN1-220ENST00000556433 IGHV1-8P0DP01 117 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 VSIG10L2P0DP72 767 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 KIR3DL2P43630 455 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 ATP1B3P54709 279 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 MEF2CQ06413 473 aaPredicted RBP18.27■□□□□ 0.52
ACTN1-220ENST00000556433 DYNC1I2Q13409 638 aaKnown RBP18.27■□□□□ 0.52
ACTN1-220ENST00000556433 EDDM3AQ14507 147 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 CNN3Q15417 329 aaKnown RBP18.27■□□□□ 0.52
ACTN1-220ENST00000556433 SSX2Q16385 188 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 OR11H6Q8NGC7 330 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 CFHR4Q92496 578 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 FOXRED1Q96CU9 486 aaPredicted RBP18.27■□□□□ 0.52
ACTN1-220ENST00000556433 ZNF714Q96N38 554 aa18.27■□□□□ 0.52
ACTN1-220ENST00000556433 hADV38S2A0JD32 116 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 ODF3BA8MYP8 253 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 HAND1O96004 215 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 RBP2P50120 134 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 CDC42P60953 191 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 ZNF626Q68DY1 528 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 CCBE1Q6UXH8 406 aaPredicted RBP18.26■□□□□ 0.51
ACTN1-220ENST00000556433 ENTHD1Q8IYW4 607 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 PP6455Q8WZ26 134 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 TCF19Q9Y242 345 aa18.26■□□□□ 0.51
ACTN1-220ENST00000556433 CYB5AP00167 134 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 IGHA1P01876 353 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 GABRR1P24046 479 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 PEX2P28328 305 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 DUSP1P28562 367 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 NPBWR2P48146 333 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 MTCP1P56278 107 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 ISL1P61371 349 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 GRK1Q15835 563 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 LDLRAD2Q5SZI1 272 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 TMEM244Q5VVB8 128 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 Q8IYB0 196 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 TPRX1Q8N7U7 411 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 DNAAF1Q8NEP3 725 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 OR52N4Q8NGI2 321 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 OR2G2Q8NGZ5 317 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 RPS4Y2Q8TD47 263 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 TRUB1Q8WWH5 349 aaKnown RBP18.25■□□□□ 0.51
ACTN1-220ENST00000556433 RNF166Q96A37 237 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-220ENST00000556433 ADAT3Q96EY9 351 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-220ENST00000556433 CDCA4Q9BXL8 241 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 CHST6Q9GZX3 395 aa18.25■□□□□ 0.51
ACTN1-220ENST00000556433 SEBOXQ9HB31 216 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-220ENST00000556433 IL36RNQ9UBH0 155 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms