RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TPRX1Q8N7U7 411 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 YIPF7Q8N8F6 280 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 DNAJC9Q8WXX5 260 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 OR5M11Q96RB7 305 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 CDCA4Q9BXL8 241 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 PKIBQ9C010 78 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 MMP28Q9H239 520 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 RAB18Q9NP72 206 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 KRT84Q9NSB2 600 aa10.71□□□□□ -0.69
TGFB3-204ENST00000556285 H2AFY2Q9P0M6 372 aaPredicted RBP10.71□□□□□ -0.69
TGFB3-204ENST00000556285 hCG_1809904A0A1W2PP81 198 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 A0A1W2PPE2 198 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 A0A1W2PQL4 384 aaPredicted RBP10.7□□□□□ -0.7
TGFB3-204ENST00000556285 A0A1W2PR64 198 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 A0A1W2PRV1 198 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 IGHA1P01876 353 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 CALCBP10092 127 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 POLR2IP36954 125 aaKnown RBP10.7□□□□□ -0.7
TGFB3-204ENST00000556285 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 DNAL1Q4LDG9 190 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 FBLN7Q53RD9 439 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 ZNF626Q68DY1 528 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 Q8N2B8 174 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 OR52N4Q8NGI2 321 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 WIPF2Q8TF74 440 aaPredicted RBP10.7□□□□□ -0.7
TGFB3-204ENST00000556285 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
TGFB3-204ENST00000556285 CEP19Q96LK0 163 aa10.7□□□□□ -0.7
TGFB3-204ENST00000556285 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 DHRS7CA6NNS2 312 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 FBXO24O75426 580 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 DNAJC8O75937 253 aaPredicted RBP10.69□□□□□ -0.7
TGFB3-204ENST00000556285 CHRM2P08172 466 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 DUSP1P28562 367 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 KIR3DL2P43630 455 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 BLCAPP62952 87 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 DYNC1I2Q13409 638 aaKnown RBP10.69□□□□□ -0.7
TGFB3-204ENST00000556285 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 CNN3Q15417 329 aaKnown RBP10.69□□□□□ -0.7
TGFB3-204ENST00000556285 KDM4DQ6B0I6 523 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 BAIAP2L2Q6UXY1 529 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 SLC25A26Q70HW3 274 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 AMIGO2Q86SJ2 522 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 RDH10Q8IZV5 341 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 PRSS35Q8N3Z0 413 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 OR11H6Q8NGC7 330 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 OR13D1Q8NGV5 346 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 RPS4Y2Q8TD47 263 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 MALSU1Q96EH3 234 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 MNTQ99583 582 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 CITED2Q99967 270 aaPredicted RBP10.69□□□□□ -0.7
TGFB3-204ENST00000556285 CHST6Q9GZX3 395 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 TBL2Q9Y4P3 447 aaKnown RBP10.69□□□□□ -0.7
TGFB3-204ENST00000556285 HILPDAQ9Y5L2 63 aa10.69□□□□□ -0.7
TGFB3-204ENST00000556285 METTL15A6NJ78 407 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 G3V2T6 193 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 SYT7O43581 403 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 PSPNO60542 156 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 MMP23AO75900 390 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 KRT8P05787 483 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 NPBWR2P48146 333 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ACTR3P61158 418 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ACTA2P62736 377 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ACTG2P63267 376 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ACTC1P68032 377 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ACTA1P68133 377 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ATP6AP1Q15904 470 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 GDPD3Q7L5L3 318 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 RNF144BQ7Z419 303 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 EGFL6Q8IUX8 553 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 OR8H2Q8N162 312 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 CIB1Q99828 191 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 PRRG3Q9BZD7 231 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 PLEKHA1Q9HB21 404 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 ABCB10Q9NRK6 738 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 RBFOX1Q9NWB1 397 aaKnown RBP10.68□□□□□ -0.7
TGFB3-204ENST00000556285 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.68□□□□□ -0.7
TGFB3-204ENST00000556285 SLC7A11Q9UPY5 501 aa10.68□□□□□ -0.7
TGFB3-204ENST00000556285 IGKV1-9A0A0C4DH69 117 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 HAND1O96004 215 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 RBP4P02753 201 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 BCL3P20749 454 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 SNU13P55769 128 aaKnown RBP10.67□□□□□ -0.7
TGFB3-204ENST00000556285 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 GID4Q8IVV7 300 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 OR4S1Q8NGB4 309 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
TGFB3-204ENST00000556285 FOXRED1Q96CU9 486 aaPredicted RBP10.67□□□□□ -0.7
TGFB3-204ENST00000556285 R3HDM4Q96D70 268 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 ADAT3Q96EY9 351 aaPredicted RBP10.67□□□□□ -0.7
TGFB3-204ENST00000556285 SNX22Q96L94 193 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 PRSS22Q9GZN4 317 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 CHST5Q9GZS9 411 aa10.67□□□□□ -0.7
TGFB3-204ENST00000556285 WNT10AQ9GZT5 417 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms