RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 IL36GQ9NZH8 169 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 MTCH1Q9NZJ7 389 aa6.4□□□□□ -1.38
TDP1-214ENST00000556063 ACANP16112 2415 aa6.4□□□□□ -1.39
TDP1-214ENST00000556063 ITPR3Q14573 2671 aa6.4□□□□□ -1.39
TDP1-214ENST00000556063 FBN2P35556 2912 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 IGHV3OR15-7A0A075B7D8 119 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 IGHV4-61A0A0C4DH41 118 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CEACAM18A8MTB9 384 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 NOTOA8MTQ0 251 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.39□□□□□ -1.39
TDP1-214ENST00000556063 H7C1Q1 480 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 SH2D1BO14796 132 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 WNT9BO14905 357 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 SLC22A1O15245 554 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 TMPRSS2O15393 492 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 NDUFB3O43676 98 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 FOXH1O75593 365 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 GABARAPO95166 117 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CDRT1O95170 752 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 BPNT1O95861 308 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 GYPAP02724 150 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CHRM2P08172 466 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CD37P11049 281 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 GTF2F2P13984 249 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 FOSL1P15407 271 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 PRKACAP17612 351 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 BCL3P20749 454 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 PRDX2P32119 198 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 SDC2P34741 201 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 GABRA2P47869 451 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 GZMKP49863 264 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 NPY4RP50391 375 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 FGF12P61328 243 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 IL13RA1P78552 427 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 DGUOKQ16854 277 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 C11orf91Q3C1V1 193 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 ESCO2Q56NI9 601 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 LRRC10Q5BKY1 277 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 ATPAF1Q5TC12 328 aaPredicted RBP6.39□□□□□ -1.39
TDP1-214ENST00000556063 GLIPR1L1Q6UWM5 242 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CLVS1Q8IUQ0 354 aaPredicted RBP6.39□□□□□ -1.39
TDP1-214ENST00000556063 C19orf18Q8NEA5 215 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CLDND2Q8NHS1 167 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 KCNG3Q8TAE7 436 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 RAB2BQ8WUD1 216 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 POM121Q96HA1 1249 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 ZNF488Q96MN9 340 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CENPOQ9BU64 300 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 MRI1Q9BV20 369 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 SEBOXQ9HB31 216 aaPredicted RBP6.39□□□□□ -1.39
TDP1-214ENST00000556063 HES4Q9HCC6 221 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 HMG20AQ9NP66 347 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 RBFOX1Q9NWB1 397 aaKnown RBP6.39□□□□□ -1.39
TDP1-214ENST00000556063 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 CLN8Q9UBY8 286 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 OR14J1Q9UGF5 321 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 F8P00451 2351 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 TLN2Q9Y4G6 2542 aa6.39□□□□□ -1.39
TDP1-214ENST00000556063 IGKV1-12A0A0C4DH73 117 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 RFPL4AA6NLU0 287 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 IFITM5A6NNB3 132 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 B4DSR2 109 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 RFPL4AL1F8VTS6 287 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 AIPO00170 330 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 DEGS1O15121 323 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 GPR37O15354 613 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 CRTAPO75718 401 aaPredicted RBP6.38□□□□□ -1.39
TDP1-214ENST00000556063 IL1AP01583 271 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 IGKV1D-12P01611 117 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 IGHV2-5P01817 119 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 SFTPBP07988 381 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 WNT2P09544 360 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 PSG2P11465 335 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 CD99P14209 185 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 ZNF44P15621 663 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 ARSBP15848 533 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 SERPINA2P20848 420 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 NPBWR2P48146 333 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 SERPINB10P48595 397 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 PITPNBP48739 271 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 TMBIM6P55061 237 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 LMO4P61968 165 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 LSM3P62310 102 aaKnown RBP6.38□□□□□ -1.39
TDP1-214ENST00000556063 GNB2P62879 340 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 MXD1Q05195 221 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 IL13RA2Q14627 380 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 ZNF146Q15072 292 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 NHLRC3Q5JS37 347 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 DMRTA1Q5VZB9 504 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 CD276Q5ZPR3 534 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 STUMQ69YW2 141 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 CRIP3Q6Q6R5 217 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 ZNF788Q6ZQV5 615 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 USP43Q70EL4 1123 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 OR2W3Q7Z3T1 314 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 RNF144BQ7Z419 303 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 C1QL2Q7Z5L3 287 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 LINC00596Q86U02 117 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 LYPD6Q86Y78 171 aa6.38□□□□□ -1.39
TDP1-214ENST00000556063 OSR2Q8N2R0 312 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms