RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CADM1Q9BY67 442 aaKnown RBP11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 PITPNC1Q9UKF7 332 aa11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 POLDIP2Q9Y2S7 368 aa11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 R4GMQ9 66 aa11.48□□□□□ -0.57
CHMP4BP1-201ENST00000556017 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 A0A1W2PRX2 142 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 DHRS7CA6NNS2 312 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 PSPNO60542 156 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 IGHA1P01876 353 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 EPHA2P29317 976 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 MNAT1P51948 309 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 CXCR4P61073 352 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ACTA2P62736 377 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ACTG2P63267 376 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ACTC1P68032 377 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ACTA1P68133 377 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 SNAPC1Q16533 368 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 AADACL4Q5VUY2 407 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ASCC1Q8N9N2 400 aaKnown RBP11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 OR4P4Q8NGL7 312 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ADGRL4Q9HBW9 690 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ABCB10Q9NRK6 738 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
CHMP4BP1-201ENST00000556017 LOC110117498-PIK3R3F6TDL0 507 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 CHRM2P08172 466 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 ANXA8P13928 327 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 CD24P25063 80 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 DAPP51397 102 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 CRISP1P54107 249 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 EDDM3BP56851 147 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 MEF2CQ06413 473 aaPredicted RBP11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 VAX1Q5SQQ9 334 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 UTF1Q5T230 341 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 FAHD1Q6P587 224 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 TRMT10AQ8TBZ6 339 aaKnown RBP11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 CNN2Q99439 309 aaKnown RBP11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 MOB1AQ9H8S9 216 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 INPP5EQ9NRR6 644 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 IKZF2Q9UKS7 526 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 TMEM14AQ9Y6G1 99 aa11.46□□□□□ -0.57
CHMP4BP1-201ENST00000556017 AQP12BA6NM10 295 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 F2RL2O00254 374 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CD33P20138 364 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GDNFP39905 211 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 NPBWR2P48146 333 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GNGT1P63211 74 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 DYNC1I2Q13409 638 aaKnown RBP11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 PTGES3Q15185 160 aaKnown RBP11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 BCL2L15Q5TBC7 163 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 MEPCEQ7L2J0 689 aaKnown RBP11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 AQP12AQ8IXF9 295 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLC35F2Q8IXU6 374 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 MYDGFQ969H8 173 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SLAMF9Q96A28 289 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SNX22Q96L94 193 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CEP19Q96LK0 163 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 HHLA2Q9UM44 414 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SESN1Q9Y6P5 492 aa11.45□□□□□ -0.58
CHMP4BP1-201ENST00000556017 FAM230AA0A1W2PPH8 454 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 H3BSH0 61 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 OR12D2P58182 307 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ESRRGP62508 458 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF91Q05481 1191 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 EGFEM1PQ0D2K5 195 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ETV3LQ6ZN32 361 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CCDC121Q6ZUS5 278 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GDPD3Q7L5L3 318 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 RNF144BQ7Z419 303 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CATSPERDQ86XM0 798 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF676Q8N7Q3 588 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CHST6Q9GZX3 395 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ZNF556Q9HAH1 456 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CLN6Q9NWW5 311 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 SNX5Q9Y5X3 404 aa11.44□□□□□ -0.58
CHMP4BP1-201ENST00000556017 IGKV1-9A0A0C4DH69 117 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 TCRBV3S1A0A5B6 114 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 GNGT2O14610 69 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 ATP8B1O43520 1251 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 MITFO75030 526 aaPredicted RBP11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 FKBP6O75344 327 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 INMTO95050 263 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 CALB2P22676 271 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 AZGP1P25311 298 aaKnown RBP11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 DUSP1P28562 367 aa11.43□□□□□ -0.58
CHMP4BP1-201ENST00000556017 OR3A1P47881 315 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms