RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ZNF383Q8NA42 475 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 OR52N5Q8NH56 324 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 SMAP2Q8WU79 429 aaPredicted RBP3.36□□□□□ -1.87
LINC00648-202ENST00000555985 TMEM171Q8WVE6 324 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 SMIM4Q8WVI0 70 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 PIGTQ969N2 578 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 HIST1H2BAQ96A08 127 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 MARS2Q96GW9 593 aaKnown RBP3.36□□□□□ -1.87
LINC00648-202ENST00000555985 FAM46AQ96IP4 442 aaKnown RBP3.36□□□□□ -1.87
LINC00648-202ENST00000555985 FOXB1Q99853 325 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 TOLLIPQ9H0E2 274 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 PLK3Q9H4B4 646 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 PRDM13Q9H4Q3 707 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 NGBQ9NPG2 151 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 SMCO4Q9NRQ5 59 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 NF1P21359 2839 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 PRR14LQ5THK1 2151 aa3.36□□□□□ -1.87
LINC00648-202ENST00000555985 ITPR3Q14573 2671 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 A0A0D9SG52 128 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 A0A0G2JK05 382 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PRSS37A4D1T9 235 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 BTBD17A6NE02 478 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 UNC119BA6NIH7 251 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RFPL4AA6NLU0 287 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 VWC2LB2RUY7 222 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 C11orf98E9PRG8 122 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RFPL4AL1F8VTS6 287 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 BLOC1S5-TXNDC5H3BN57 136 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PRODHO43272 600 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 IGHV4-39P01824 125 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CST2P09228 141 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 QDPRP09417 244 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 NQO2P16083 231 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CDKN2AP42771 156 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MTNR1AP48039 350 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 GIPRP48546 466 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CSNK1A1P48729 337 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF83P51522 516 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ART1P52961 327 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 OR10A3P58181 314 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 FMODQ06828 376 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ADIPOQQ15848 244 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 C2orf68Q2NKX9 166 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ACSM5Q6NUN0 579 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SMARCD3Q6STE5 483 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 KLHL24Q6TFL4 600 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 BAIAP2L2Q6UXY1 529 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PRSS45Q7RTY3 260 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SYT9Q86SS6 491 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 TGIF2LXQ8IUE1 241 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PAQR4Q8N4S7 273 aaPredicted RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CPEB3Q8NE35 698 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 OR4F15Q8NGB8 312 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MUCL1Q96DR8 90 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MISP3Q96FF7 219 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 C1orf159Q96HA4 380 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 TEAD3Q99594 435 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CCL19Q99731 98 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 GINS4Q9BRT9 223 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF649Q9BS31 505 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 WDR13Q9H1Z4 485 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 AUNIPQ9H7T9 357 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PLEKHA1Q9HB21 404 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 PNRC2Q9NPJ4 139 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MRPL15Q9P015 296 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ADAM18Q9Y3Q7 739 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ANK2Q01484 3957 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 POLQO75417 2590 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 IGLV3-9A0A075B6K5 115 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 A0A096LPE4 126 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 A0A1W2PPZ6 126 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 OR6C6A6NF89 314 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 A6NIZ1 184 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 NUDT19A8MXV4 375 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 OR10H3O60404 316 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 KHDRBS3O75525 346 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 NDUFB2O95178 105 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SLC2A10O95528 541 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MT-ND4LP03901 98 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SERPINA5P05154 406 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 B4GALT1P15291 398 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 HIST1H1BP16401 226 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RAB5CP51148 216 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CDH11P55287 796 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SMIM11AP58511 58 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RAP1BP61224 184 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RAP1AP62834 184 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 SRSF3P84103 164 aaKnown RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 CDK5Q00535 292 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 POU4F2Q12837 409 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 GINS1Q14691 196 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 MPPED2Q15777 294 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 RSPO1Q2MKA7 263 aaPredicted RBP3.35□□□□□ -1.87
LINC00648-202ENST00000555985 C9orf135Q5VTT2 229 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 OR52W1Q6IF63 320 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 ZNF813Q6ZN06 617 aa3.35□□□□□ -1.87
LINC00648-202ENST00000555985 LINC00471Q8N535 108 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms