RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	CRIP3	Q6Q6R5	217 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	ASCL4	Q6XD76	172 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	ACP7	Q6ZNF0	438 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	NR2C2AP	Q86WQ0	139 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	LYPD6	Q86Y78	171 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	OSR2	Q8N2R0	312 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	SPIC	Q8N5J4	248 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	DEFB108B	Q8NET1	73 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR10K1	Q8NGX5	313 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	C10orf105	Q8TEF2	133 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	FAM46B	Q96A09	425 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	GAL3ST1	Q99999	423 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	BPESC1	Q9GZL8	116 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	WDR13	Q9H1Z4	485 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	HES4	Q9HCC6	221 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	HMG20A	Q9NP66	347 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	DCAF16	Q9NXF7	216 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	PCDHB10	Q9UN67	800 aa		10.51	□□□□□ -0.73
ABCD4-223	ENST00000555904	IGHV3OR15-7	A0A075B7D8	119 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904		A0A0G2JK05	382 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	SFTPB	P07988	381 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	CALCB	P10092	127 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	SLC2A2	P11168	524 aa	Predicted RBP	10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	MGMT	P16455	207 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	SNU13	P55769	128 aa	Known RBP	10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	SCAND1	P57086	179 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	ZNF404	Q494X3	552 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	FAM201A	Q5SY85	155 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	FAM166A	Q6J272	317 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	DCDC5	Q6ZRR9	648 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	NLRC3	Q7RTR2	1065 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR2W3	Q7Z3T1	314 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	C1QL2	Q7Z5L3	287 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	LINC00596	Q86U02	117 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	C19orf18	Q8NEA5	215 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR51D1	Q8NGF3	324 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	KCTD12	Q96CX2	325 aa	Known RBP	10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	URM1	Q9BTM9	101 aa	Known RBP	10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	TMEM59	Q9BXS4	323 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	SELENOI	Q9C0D9	397 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	ASH1L	Q9NR48	2969 aa	Known RBP	10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR14J1	Q9UGF5	321 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	ST3GAL6	Q9Y274	331 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	ETV7	Q9Y603	341 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	APC	P25054	2843 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	BAHCC1	Q9P281	2608 aa		10.5	□□□□□ -0.73
ABCD4-223	ENST00000555904	ARFGEF3	Q5TH69	2177 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904		F8VVB4	439 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904		F8VWA3	439 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904		H3BUI4	141 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	SH2D1B	O14796	132 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	MPIG6B	O95866	241 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	IGHV2-70	P01814	119 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	GYPA	P02724	150 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	CPT2	P23786	658 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	NR4A2	P43354	598 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	GABRA2	P47869	451 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	RBM11	P57052	281 aa	Known RBP	10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	IKZF1	Q13422	519 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	C2orf76	Q3KRA6	126 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	TMEM155	Q4W5P6	130 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	MZT2A	Q6P582	158 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	SLC36A1	Q7Z2H8	476 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	LRRC28	Q86X40	367 aa	Predicted RBP	10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	ACOT12	Q8WYK0	555 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	SLC25A28	Q96A46	364 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	DNTTIP1	Q9H147	329 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	NARFL	Q9H6Q4	476 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	CCDC59	Q9P031	241 aa	Known RBP	10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	ABRACL	Q9P1F3	81 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	ITGB1BP2	Q9UKP3	347 aa		10.49	□□□□□ -0.73
ABCD4-223	ENST00000555904	IGHV4-30-2	A0A087WSY4	118 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	METTL21EP	A6NDL7	271 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	RFPL4A	A6NLU0	287 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	RFPL4AL1	F8VTS6	287 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	TMPRSS2	O15393	492 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	HAND1	O96004	215 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	VSIG8	P0DPA2	414 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	SNRPB	P14678	240 aa	Known RBP	10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	ZNF44	P15621	663 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	RPS2	P15880	293 aa	Known RBP	10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	ZNF182	P17025	639 aa	Predicted RBP	10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	RAB6A	P20340	208 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	PRDX2	P32119	198 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	RBMX	P38159	391 aa	Known RBP	10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	IL13RA1	P78552	427 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	HOXA4	Q00056	320 aa	Predicted RBP	10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	SCN1B	Q07699	218 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	IL13RA2	Q14627	380 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	ZNF146	Q15072	292 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	PIGY	Q3MUY2	71 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	NHLRC3	Q5JS37	347 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	STUM	Q69YW2	141 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	TMEM104	Q8NE00	496 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904		Q8NFD4	153 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR5T2	Q8NGG2	359 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	OR51T1	Q8NGJ9	327 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	LGALS14	Q8TCE9	139 aa		10.48	□□□□□ -0.73
ABCD4-223	ENST00000555904	DYNC2LI1	Q8TCX1	351 aa		10.48	□□□□□ -0.73

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