RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 HIST1H1TP22492 207 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC2A5P22732 501 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CXCR1P25024 350 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 HTR1EP28566 365 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 GPR1P46091 355 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CX3CR1P49238 355 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 EVX1P49640 407 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RAB5CP51148 216 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TDGF1P3P51864 188 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TCTAP57738 103 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TAS2R41P59536 307 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RAB5BP61020 215 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TBPL1P62380 186 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 HMGCS1Q01581 520 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ACVR1Q04771 509 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF616Q08AN1 781 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 INCA1Q0VD86 236 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 PRR4Q16378 134 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 MRGPRG-AS1Q2M3A8 158 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 NSUN5P1Q3KNT7 163 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 C14orf177Q52M58 125 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ACSBG2Q5FVE4 666 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CLLU1Q5K131 121 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 GPRC6AQ5T6X5 926 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 HIST2H3PS2Q5TEC6 136 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 GFI1BQ5VTD9 330 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RSBN1Q5VWQ0 802 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ANKRD22Q5VYY1 191 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 WDR74Q6RFH5 385 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CXCL17Q6UXB2 119 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 GSG1LQ6UXU4 331 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 C19orf35Q6ZS72 473 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC25A48Q6ZT89 311 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 Q6ZTC4 211 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC16A13Q7RTY0 426 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CROCCP2Q86T23 111 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 APOBEC3FQ8IUX4 373 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 BAP18Q8IXM2 172 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 CPNE9Q8IYJ1 553 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC35F6Q8N357 371 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 LRRC25Q8N386 305 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 NOXO1Q8NFA2 376 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC26A10Q8NG04 563 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 OR4P4Q8NGL7 312 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 OR5J2Q8NH18 312 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RNASEH2CQ8TDP1 164 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ZFP90Q8TF47 636 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SDR42E1Q8WUS8 393 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 UCN3Q969E3 161 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 FGGYQ96C11 551 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RPUSD4Q96CM3 377 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SMIM19Q96E16 107 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ITCHQ96J02 903 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 PGLYRP4Q96LB8 373 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 OR7D2Q96RA2 312 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 OR8B4Q96RC9 309 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF382Q96SR6 550 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 DOK1Q99704 481 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ARHGDIGQ99819 225 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SULT4A1Q9BR01 284 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 C1orf50Q9BV19 199 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RNF126Q9BV68 326 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 MS4A8Q9BY19 250 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 UGT2B28Q9BY64 529 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TBL1XR1Q9BZK7 514 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ARL6Q9H0F7 186 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 DEFB129Q9H1M3 183 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 Q9H521 79 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ARMC7Q9H6L4 198 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 UBE2ZQ9H832 354 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RNF122Q9H9V4 155 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 TMEM27Q9HBJ8 222 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 FBXO6Q9NRD1 293 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 NLE1Q9NVX2 485 aaPredicted RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 MED29Q9NX70 200 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 MED11Q9P086 117 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 JPT1Q9UK76 154 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 FBXO5Q9UKT4 447 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 NEU3Q9UQ49 428 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 ZFP30Q9Y2G7 519 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 RBM7Q9Y580 266 aaKnown RBP2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 FLVCR1Q9Y5Y0 555 aa2.3□□□□□ -2.04
MTHFD1-212ENST00000555858 SPEF2Q9C093 1822 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 EPRSP07814 1512 aaKnown RBP2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 KDM5DQ9BY66 1539 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 COL5A2P05997 1499 aaPredicted RBP2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 TEX14Q8IWB6 1497 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 KDM6AO15550 1401 aaPredicted RBP2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 CNTNAP1P78357 1384 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 IGSF9BQ9UPX0 1349 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 IGHV1OR15-1A0A075B7D0 117 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 IGKV3D-15A0A087WSY6 115 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 IGHV1OR21-1A0A087WYE8 117 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 A0A096LPI6 279 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 TRBV9A0A0B4J1U6 114 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF816-ZNF321PA0A0X1KG74 233 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 C20orf202A1L168 122 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 TRAPPC13A5PLN9 417 aa2.29□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC22A20A6NK97 555 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms