RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FAM90A7PA6NKC0 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A22PA8MWA6 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A12PA8MX19 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A5PA8MXJ8 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A23PA8MXZ1 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 SRRM5B3KS81 715 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 SH2D1BO14796 132 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 AKR7A2O43488 359 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 HPGDSO60760 199 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 RHBDL1O75783 438 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 PAHP00439 452 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 KNG1P01042 644 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 CHRM2P08172 466 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A15PP0C7V4 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A13PP0C7W8 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A14PP0C7W9 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 FAM90A24PP0C7X0 464 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 CD37P11049 281 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 MUC1P15941 1255 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 GABRR1P24046 479 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 COL8A1P27658 744 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 CFHR2P36980 270 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 MNDAP41218 407 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NR4A2P43354 598 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 PITPNBP48739 271 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 GMFBP60983 142 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 RPS27AP62979 156 aaKnown RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NHLRC3Q5JS37 347 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 ASCL4Q6XD76 172 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 LAX1Q8IWV1 398 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 CHST4Q8NCG5 386 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 PPP1R35Q8TAP8 253 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NEK7Q8TDX7 302 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 RAB1CQ92928 201 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 WDFY2Q96P53 400 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NEDD4LQ96PU5 975 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NKX3-1Q99801 234 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 NXF2Q9GZY0 626 aaKnown RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 BANF2Q9H503 90 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 CHODLQ9H9P2 273 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 RBFOX1Q9NWB1 397 aaKnown RBP9.46□□□□□ -0.9
SHMT2-220ENST00000555634 EXTL2Q9UBQ6 330 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 ST3GAL6Q9Y274 331 aa9.46□□□□□ -0.9
SHMT2-220ENST00000555634 ANKRD17O75179 2603 aaKnown RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 A0A0B4J203 849 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 A0A1W2PPR1 153 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ISPDA4D126 451 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 OOEPA6NGQ2 149 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM14DPA8MWL7 114 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 F12P00748 615 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 CD8AP01732 235 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF44P15621 663 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 SNU13P55769 128 aaKnown RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ATP5J2P56134 94 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 IL18Q14116 193 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 RBM39Q14498 530 aaKnown RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ACP7Q6ZNF0 438 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF826PQ6ZT77 177 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 LYPD6Q86Y78 171 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 SLC25A28Q96A46 364 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 GAL3ST1Q99999 423 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 NUDT16L1Q9BRJ7 211 aaKnown RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 WDR12Q9GZL7 423 aaKnown RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 FGF23Q9GZV9 251 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-220ENST00000555634 ABCG5Q9H222 651 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 MTCH1Q9NZJ7 389 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 PLEKHA6Q9Y2H5 1048 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 COL12A1Q99715 3063 aa9.45□□□□□ -0.9
SHMT2-220ENST00000555634 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 NDUFA2O43678 99 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 CYB5R3P00387 301 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-220ENST00000555634 HPXP02790 462 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 HEXAP06865 529 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 SFTPBP07988 381 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 CD80P33681 288 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
SHMT2-220ENST00000555634 PDLIM4P50479 330 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 DSCR9P59020 149 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 BTG1P62324 171 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 UNC119Q13432 240 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 NKAPLQ5M9Q1 402 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 ATAD3CQ5T2N8 411 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 FAM131AQ6UXB0 335 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 NLRC3Q7RTR2 1065 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 SPICQ8N5J4 248 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 NINJ1Q92982 152 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 RAB3CQ96E17 227 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 Q96M66 194 aa9.44□□□□□ -0.9
SHMT2-220ENST00000555634 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms