RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CCDC169A6NNP5 214 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 C9JQL5 133 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 H3BMM0 161 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 H3BN98 237 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 RNF113AO15541 343 aaKnown RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 PSCAO43653 123 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CDS2O95674 445 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 GCGP01275 180 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 OR4Q2P0C623 313 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 GZMAP12544 262 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TUBG1P23258 451 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TEAD1P28347 426 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 COILP38432 576 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 ZNF140P52738 457 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 SLC18A1P54219 525 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 RAB25P57735 213 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 RPL18AQ02543 176 aaKnown RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 FOXF1Q12946 379 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 IL18Q14116 193 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ENDOGQ14249 297 aaKnown RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 CST6Q15828 149 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 SSX1Q16384 188 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 FAM104BQ5XKR9 115 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 NOXRED1Q6NXP6 359 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ZNF322Q6U7Q0 402 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 CLEC2AQ6UVW9 174 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 EPGNQ6UW88 154 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CLEC19AQ6UXS0 136 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TCF23Q7RTU1 214 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 KATNAL2Q8IYT4 538 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 MICU2Q8IYU8 434 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 HS3ST5Q8IZT8 346 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ZFP82Q8N141 532 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 OR4K2Q8NGD2 314 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 MFSD8Q8NHS3 518 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 RNASE11Q8TAA1 199 aaKnown RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 BAALCQ8WXS3 180 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TMEM234Q8WY98 164 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TNFRSF14Q92956 283 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 YIPF5Q969M3 257 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 KIAA1143Q96AT1 154 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 UBE2WQ96B02 151 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 C9orf72Q96LT7 481 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ANAPC13Q9BS18 74 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ANP32EQ9BTT0 268 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TMED9Q9BVK6 235 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TSSK6Q9BXA6 273 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 DEFB129Q9H1M3 183 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 OR2AG1Q9H205 316 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TXNIPQ9H3M7 391 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CLSTN2Q9H4D0 955 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 C8orf33Q9H7E9 229 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 RHOFQ9HBH0 211 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CD209Q9NNX6 404 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 PRSS16Q9NQE7 514 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TUBG2Q9NRH3 451 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TREX1Q9NSU2 369 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TMEM106BQ9NUM4 274 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TAS2R9Q9NYW1 312 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 TAC3Q9UHF0 121 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 PRO0628Q9UI54 55 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 ZNF443Q9Y2A4 671 aaPredicted RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 INSIG2Q9Y5U4 225 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CHD2O14647 1828 aaKnown RBP0.54□□□□□ -2.32
SRP54-207ENST00000555535 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 CACNA1GO43497 2377 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 PTPRBP23467 1997 aa0.54□□□□□ -2.32
SRP54-207ENST00000555535 COL4A2P08572 1712 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 LOC389332A0A1B0GUA5 103 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 FAM240AA0A1B0GVK7 77 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 SLC22A20A6NK97 555 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 LEUTXA8MZ59 168 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 F5H5T6 163 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 G3V3Q6 166 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 KLRC4-KLRK1H3BQV0 150 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 EEF1E1O43324 174 aaKnown RBP0.53□□□□□ -2.32
SRP54-207ENST00000555535 AKR7A2O43488 359 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 COX7A2P2O60397 106 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 POP7O75817 140 aaKnown RBP0.53□□□□□ -2.32
SRP54-207ENST00000555535 RLN2P04090 185 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 TAC1P20366 129 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 M6PRP20645 277 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 CD82P27701 267 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 IMPA1P29218 277 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ERFP50548 548 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 BCAP31P51572 246 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 LCN2P80188 198 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ST3GAL4Q11206 333 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 DHRS2Q13268 280 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 GPR176Q14439 515 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 BCL2A1Q16548 175 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 FBXL19-AS1Q494R0 122 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 ACTBL2Q562R1 376 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 BEX5Q5H9J7 111 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 UBE2NLQ5JXB2 153 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 TPRG1LQ5T0D9 272 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 NIPAL1Q6NVV3 410 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 DAW1Q8N136 415 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 LINC00337Q8N6G1 96 aa0.53□□□□□ -2.32
SRP54-207ENST00000555535 C8orf31Q8N9H6 132 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms