RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 WIPI1Q5MNZ9 446 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-216ENST00000555002 COL5A1-AS1Q5SY13 56 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 C17orf99Q6UX52 265 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 KLHDC9Q8NEP7 349 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 NOXO1Q8NFA2 376 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 KCNK15Q9H427 330 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SH2D2AQ9NP31 389 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 ASCL3Q9NQ33 180 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SLC45A2Q9UMX9 530 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 A0A0B4J293 547 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 PRF1P14222 555 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SDHAP31040 664 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SOX8P57073 446 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 FOXO1Q12778 655 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 KLRB1Q12918 225 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 GGTLC2Q14390 218 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 OR52N1Q8NH53 320 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 PARP11Q9NR21 331 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 UQCC1Q9NVA1 299 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TNFRSF10CO14798 259 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 CD37P11049 281 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 LIPAP38571 399 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF137PP52743 207 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 MS4A10Q96PG2 267 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 RNF167Q9H6Y7 350 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TUBA4BQ9H853 241 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 FKBP11Q9NYL4 201 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 A6NDN8 102 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 GSTZ1O43708 216 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TMIGD3P0DMS9 266 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM183BQ1AE95 376 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 UBALD2Q8IYN6 164 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 ZBP1Q9H171 429 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 PRSS44E7EML9 344 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 RNF212Q495C1 297 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 FCRL6Q6DN72 434 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 ZNF774Q6NX45 483 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 NUFIP2Q7Z417 695 aaKnown RBP6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TBX15Q96SF7 602 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 THYN1Q9P016 225 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 HS3ST2Q9Y278 367 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 MAP1LC3B2A6NCE7 125 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SS18L1O75177 396 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-216ENST00000555002 ST6GAL1P15907 406 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 SYT14P1Q58G82 188 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 CCL4L1Q8NHW4 92 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 MAP1LC3BQ9GZQ8 125 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 GNG7O60262 68 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM52BQ4KMG9 183 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 NKAIN4Q8IVV8 208 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 CARFQ8N187 725 aa6.17□□□□□ -1.42
SYNE2-216ENST00000555002 CGB1A6NKQ9 187 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 IZUMO4Q1ZYL8 232 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PAQR6Q6TCH4 344 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 D2HGDHQ8N465 521 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MRGPRX4Q96LA9 322 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 ZIC5Q96T25 663 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 FGF22Q9HCT0 170 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CACNG5Q9UF02 275 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CACFD1Q9UGQ2 172 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 SCN11AQ9UI33 1791 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 LINC01553A4QN01 128 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CEACAM3P40198 252 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 RNPS1Q15287 305 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 LIPNQ5VXI9 398 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 LYG2Q86SG7 212 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 Q8IYB0 196 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 KTI12Q96EK9 354 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 RTN4RQ9BZR6 473 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TOLLIPQ9H0E2 274 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 hADV38S2A0JD32 116 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 GEMIN2O14893 280 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 RPL29P47914 159 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 KCNJ3P48549 501 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 IGFBP7Q16270 282 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 TMEM215Q68D42 235 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 ARRB2P32121 409 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 MEOX2P50222 304 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 WNT3P56703 355 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 COL13A1Q5TAT6 717 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 OR1L6Q8NGR2 347 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 AQP10Q96PS8 301 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 DOCK3Q8IZD9 2030 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 NGFP01138 241 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 POLR2IP36954 125 aaKnown RBP6.16□□□□□ -1.42
SYNE2-216ENST00000555002 EBLN2Q6P2I7 272 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 PRNTQ86SH4 94 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 OR8I2Q8N0Y5 310 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 A0A1W2PR48 441 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 C2CD4DB7Z1M9 353 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 ARNTLO00327 626 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 FZD6O60353 706 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 CST4P01036 141 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 LOXL3P58215 753 aa6.16□□□□□ -1.42
SYNE2-216ENST00000555002 C21orf62-AS1Q17RA5 79 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms