RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 OR10A3P58181 314 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 MXD1Q05195 221 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 NHLRC3Q5JS37 347 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 SPIN3Q5JUX0 258 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM201AQ5SY85 155 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 ATPAF1Q5TC12 328 aaPredicted RBP13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 DCDC5Q6ZRR9 648 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 NR2C2APQ86WQ0 139 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 EMG1Q92979 244 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 SLC25A28Q96A46 364 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 C1orf147Q96MC9 270 aaPredicted RBP13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF488Q96MN9 340 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 RBM38Q9H0Z9 239 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 FBLN5Q9UBX5 448 aa13.77□□□□□ -0.21
SPTLC2-203ENST00000554901 ISPDA4D126 451 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 OR2AT4A6NND4 320 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 F8VVB4 439 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 F8VWA3 439 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 GTF2F2P13984 249 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 RPS19P39019 145 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 SERPINB10P48595 397 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 SCAND1P57086 179 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF146Q15072 292 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 AVPI1Q5T686 147 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 STUMQ69YW2 141 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 SFRP4Q6FHJ7 346 aaPredicted RBP13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 OR51T1Q8NGJ9 327 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 KCNG3Q8TAE7 436 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 ISOC1Q96CN7 298 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 Q96MF0 132 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 NKX3-1Q99801 234 aaPredicted RBP13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 TMEM246Q9BRR3 403 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 KAAG1Q9UBP8 84 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 GLS2Q9UI32 602 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 MYO9AB2RTY4 2548 aa13.76□□□□□ -0.21
SPTLC2-203ENST00000554901 CSMD1Q96PZ7 3565 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 TNFRSF13BO14836 293 aaPredicted RBP13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 ARSBP15848 533 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 TGFBR1P36897 503 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 SLC22A6Q4U2R8 563 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 OR2W3Q7Z3T1 314 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 ANGPTL6Q8NI99 470 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 SLC25A46Q96AG3 418 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM3DQ96BQ1 224 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 DCSTAMPQ9H295 470 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 MIOXQ9UGB7 285 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 MAP1AP78559 2803 aaPredicted RBP13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 CREBBPQ92793 2442 aa13.75□□□□□ -0.21
SPTLC2-203ENST00000554901 H3BMQ9 156 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF205O95201 554 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 HTR3BO95264 441 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 HEXAP06865 529 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 CLEC2LP0C7M8 214 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 PSG2P11465 335 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 PRKACAP17612 351 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 USF1P22415 310 aaPredicted RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 GMFBP60983 142 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 LOXL1Q08397 574 aaPredicted RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 FAM189A2Q15884 450 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 HES5Q5TA89 166 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 LINC00596Q86U02 117 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 WFDC11Q8NEX6 87 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 RSL24D1Q9UHA3 163 aaKnown RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF222Q9UK12 451 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 IGHV3OR15-7A0A075B7D8 119 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 NKX6-3A6NJ46 265 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 CEACAM18A8MTB9 384 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 TMEM14DPA8MWL7 114 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 H3BUI4 141 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 VSIG8P0DPA2 414 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 CALCBP10092 127 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 SERPINA2P20848 420 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 RBMXP38159 391 aaKnown RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 HOXA4Q00056 320 aaPredicted RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 ZNF788Q6ZQV5 615 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 NLRC3Q7RTR2 1065 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 C19orf18Q8NEA5 215 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 OR10K1Q8NGX5 313 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 PTX4Q96A99 478 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 KCTD12Q96CX2 325 aaKnown RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 RAB39BQ96DA2 213 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 SEH1LQ96EE3 360 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 SDSLQ96GA7 329 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 MED30Q96HR3 178 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 REG4Q9BYZ8 158 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 LIN7BQ9HAP6 207 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 PATZ1Q9HBE1 687 aaKnown RBP13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 DAPK2Q9UIK4 370 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 ITGB1BP2Q9UKP3 347 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 PCDHB10Q9UN67 800 aa13.74□□□□□ -0.21
SPTLC2-203ENST00000554901 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
SPTLC2-203ENST00000554901 A0A096LNT2 108 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms