RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 Q96MT0 163 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 TEAD3Q99594 435 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DHRS9Q9BPW9 319 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 MYOZ1Q9NP98 299 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-211ENST00000554437 MED4Q9NPJ6 270 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 DIABLOQ9NR28 239 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 RBM22Q9NW64 420 aaKnown RBP eCLIP3.24□□□□□ -1.894e-7■■■■■ 38
SCFD1-211ENST00000554437 UVRAGQ9P2Y5 699 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 TP53TG1Q9Y2A0 90 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 CEMIPQ8WUJ3 1361 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 ANKRD30AQ9BXX3 1397 aa3.24□□□□□ -1.89
SCFD1-211ENST00000554437 PCDH11XQ9BZA7 1347 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 EFCAB9A8MZ26 197 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM238C9JI98 176 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 J3QT63 122 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 KCNK1O00180 336 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 PHYHO14832 338 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 KMOO15229 486 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 SLC31A2O15432 143 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 CIAO1O76071 339 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 ZFYVE9O95405 1425 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 SOX14O95416 240 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 MMP7P09237 267 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 CEACAM6P40199 344 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 FGF8P55075 233 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 OR4D2P58180 307 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 PRR3P79522 188 aaKnown RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 BAXQ07812 192 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 PRSS8Q16651 343 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 C4orf26Q17RF5 130 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 CLEC12BQ2HXU8 276 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 FAM19A5Q7Z5A7 132 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 FAM71E2Q8N5Q1 922 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 UBAC2Q8NBM4 344 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF680Q8NEM1 530 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 HAUS1Q96CS2 278 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 TMED9Q9BVK6 235 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 SLC22A4Q9H015 551 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 MAP1LC3AQ9H492 121 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 METTL17Q9H7H0 456 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 RRAGDQ9NQL2 400 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM100Q9NV29 134 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 ZNF225Q9UK10 706 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 NDRG2Q9UN36 371 aaKnown RBP3.23□□□□□ -1.89
SCFD1-211ENST00000554437 TP53TG5Q9Y2B4 290 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 ARL2BPQ9Y2Y0 163 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 MMACHCQ9Y4U1 282 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 ORC6Q9Y5N6 252 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 RLFQ13129 1914 aa3.23□□□□□ -1.89
SCFD1-211ENST00000554437 TAAR5O14804 337 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 FAM189A1O60320 539 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 STX10O60499 249 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 RAD1O60671 282 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 RP2O75695 350 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 GATBO75879 557 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 SERPINA1P01009 418 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 TNNC2P02585 160 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 MRPL3P09001 348 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 IGHV3-43DP0DP04 118 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 PAX6P26367 422 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 TSPOP30536 169 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 RPS10P46783 165 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 P2RX1P51575 399 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 RANP62826 216 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 ARG2P78540 354 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 FAM53BQ14153 422 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 CEACAM16Q2WEN9 425 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 TTC32Q5I0X7 151 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 COA6Q5JTJ3 125 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 AVPI1Q5T686 147 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 STEAP4Q687X5 459 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 UGT2A3Q6UWM9 527 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 TMEM61Q8N0U2 210 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 ARIH2OSQ8N7S6 290 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 OR1M1Q8NGA1 313 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 OR11H7Q8NGC8 314 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 OR52E4Q8NGH9 312 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 OR13G1Q8NGZ3 307 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 CASTOR1Q8WTX7 329 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 BLNKQ8WV28 456 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 SEH1LQ96EE3 360 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 SMIM12Q96EX1 92 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 GALNT14Q96FL9 552 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 RNF185Q96GF1 192 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 CEP19Q96LK0 163 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 OR2M4Q96R27 311 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 PITX2Q99697 317 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 PRRT1Q99946 306 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 TAPBPLQ9BX59 468 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 EDA2RQ9HAV5 297 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 KLK12Q9UKR0 248 aa3.22□□□□□ -1.89
SCFD1-211ENST00000554437 FARSAQ9Y285 508 aaKnown RBP3.22□□□□□ -1.89
SCFD1-211ENST00000554437 LTBP1Q14766 1721 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms