RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 FAM183AA6NL82 134 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ARPC1BO15143 372 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 RGS5O15539 181 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 BUB3O43684 328 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 RCBTB2O95199 551 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 HLA-DQB1P01920 261 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 CLPSP04118 112 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 SERPINE2P07093 398 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 UBCP0CG48 685 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 LIPCP11150 499 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 CELP19835 753 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 CFL1P23528 166 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 GIFP27352 417 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 NPBWR2P48146 333 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 EVX1P49640 407 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR1D5P58170 312 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 DEFA1P59665 94 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 DEFA3P59666 94 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 RPS18P62269 152 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 PPIAP62937 165 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 S100A12P80511 92 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF85Q03923 595 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ASAH1Q13510 395 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 INSL4Q14641 139 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 KCNJ8Q15842 424 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 DEFB110Q30KQ9 67 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 LINC00303Q3SY05 128 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 C14orf28Q4W4Y0 310 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ULK3Q6PHR2 472 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 SMARCD3Q6STE5 483 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 NPSR1Q6W5P4 371 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 FOXL2NBQ6ZUU3 175 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 NR2C2APQ86WQ0 139 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OOSP2Q86WS3 158 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 GID4Q8IVV7 300 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 MMD2Q8IY49 270 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 RDH10Q8IZV5 341 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ACBD7Q8N6N7 88 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 GDPD1Q8N9F7 314 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF680Q8NEM1 530 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ATP6V1C2Q8NEY4 427 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 DMBX1Q8NFW5 382 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR5AU1Q8NGC0 362 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR52R1Q8NGF1 315 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR6M1Q8NGM8 313 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR4D5Q8NGN0 318 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 OR9A4Q8NGU2 314 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 BPIFA2Q96DR5 249 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF285Q96NJ3 590 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 AGAP4Q96P64 663 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 TNFRSF13CQ96RJ3 184 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 TEAD3Q99594 435 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ATF6BQ99941 703 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 TRAF4Q9BUZ4 470 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 TIGARQ9NQ88 270 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 CMC2Q9NRP2 79 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ZFP57Q9NU63 452 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 BABAM2Q9NXR7 383 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ICAM5Q9UMF0 924 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 GSTK1Q9Y2Q3 226 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 STARD10Q9Y365 291 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 MED31Q9Y3C7 131 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 ITPR2Q14571 2701 aa4.41□□□□□ -1.7
MTHFD1-206ENST00000554353 USP9YO00507 2555 aaPredicted RBP4.4□□□□□ -1.7
MTHFD1-206ENST00000554353 USP9XQ93008 2570 aaPredicted RBP4.4□□□□□ -1.7
MTHFD1-206ENST00000554353 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TRAV27A0A087WT01 109 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 IGHV5-10-1A0A0J9YXX1 117 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 FABP12A6NFH5 140 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CYSRT1A8MQ03 144 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 SYT7O43581 403 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CHP2O43745 196 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 HPGDSO60760 199 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CTNSO60931 367 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 REM1O75628 298 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 SC5DO75845 299 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR2J3O76001 311 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RAB3DO95716 219 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 IGHV4-39P01824 125 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RAF1P04049 648 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 HLA-DPB1P04440 258 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 GSTT2P0CG29 244 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 GSTT2BP0CG30 244 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CT45A8P0DMV1 189 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CT45A9P0DMV2 189 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CCL4P13236 92 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RNH1P13489 461 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CNR1P21554 472 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CD82P27701 267 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RBM34P42696 430 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 GLIPR1P48060 266 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RFX3P48380 749 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TMED10P49755 219 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ATP5J2P56134 94 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 MAZP56270 477 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms