RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 FBLIM1Q8WUP2 373 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 NRG4Q8WWG1 115 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 AJUBAQ96IF1 538 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF184Q99676 751 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 NRIP2Q9BQI9 281 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 JAM3Q9BX67 310 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 ANKRD60Q9BZ19 345 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 PKIBQ9C010 78 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 RANBP3Q9H6Z4 567 aaPredicted RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 HEXA-AS1Q9H8Q6 139 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 HES4Q9HCC6 221 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 TCF7L1Q9HCS4 588 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 RAB18Q9NP72 206 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 PLCXD1Q9NUJ7 323 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 CNOT2Q9NZN8 540 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 OR52A1Q9UKL2 312 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 IKZF2Q9UKS7 526 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 EXOGQ9Y2C4 368 aaKnown RBP5.39□□□□□ -1.55
SLIRP-203ENST00000554074 SNX5Q9Y5X3 404 aa5.39□□□□□ -1.55
SLIRP-203ENST00000554074 EFCAB10A6NFE3 127 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ANKRD61A6NGH8 418 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 RFPL4AA6NLU0 287 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 VGLL3A8MV65 326 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 RFPL4AL1F8VTS6 287 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 H3BUX3 64 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 K7N7A8 449 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ENTPD6O75354 484 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 NXPH2O95156 264 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 RBP4P02753 201 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 TFF1P04155 84 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 PIPP12273 146 aaPredicted RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 MYF6P23409 242 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 DCKP27707 260 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 PRDX2P32119 198 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 KIR2DS4P43632 304 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 HAAOP46952 286 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 AQP4P55087 323 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 DLX1P56177 255 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ACTA2P62736 377 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ACTG2P63267 376 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 IL24Q13007 206 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 C2orf68Q2NKX9 166 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 LRRC75BQ2VPJ9 315 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 IZUMO2Q6UXV1 221 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 PLEKHG7Q6ZR37 379 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 FAM185AQ8N0U4 392 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 PNKDQ8N490 385 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ACBD7Q8N6N7 88 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 OR51G2Q8NGK0 314 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 UBE2FQ969M7 185 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 C10orf35Q96D05 121 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 SSX3Q99909 188 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 CDCA4Q9BXL8 241 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 YTHDF1Q9BYJ9 559 aaKnown RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 SEBOXQ9HB31 216 aaPredicted RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 ELL3Q9HB65 397 aaPredicted RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 FGF20Q9NP95 211 aaPredicted RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 C19orf12Q9NSK7 152 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 MRM2Q9UI43 246 aaKnown RBP5.38□□□□□ -1.55
SLIRP-203ENST00000554074 SLC22A13Q9Y226 551 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 NOTCH3Q9UM47 2321 aa5.38□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PRD5 423 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PRF3 423 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 A0A1W2PRM7 423 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 FAM90A8PA6NJQ4 464 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 C17orf98A8MV24 154 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 J3QRE1 110 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 DENRO43583 198 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 SYNGR1O43759 233 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 ANGPTL7O43827 346 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 MRPS14O60783 128 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 WBP4O75554 376 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 IGHA1P01876 353 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 TK1P04183 234 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 KRT8P05787 483 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CHRM2P08172 466 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CCDC159P0C7I6 412 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 DBTP11182 482 aaKnown RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 GABRA5P31644 462 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 FUT6P51993 359 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 EFNB2P52799 333 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CAPZA1P52907 286 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 DLX6P56179 175 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 PRB3Q04118 309 aaPredicted RBP5.37□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF91Q05481 1191 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 GALEQ14376 348 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 HERPUD1Q15011 391 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 RNLSQ5VYX0 342 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 TMEM200BQ69YZ2 307 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 SLC35E4Q6ICL7 350 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 CATSPERDQ86XM0 798 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 MKXQ8IYA7 352 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 Q8IYB0 196 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 SYS1Q8N2H4 156 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 OR4C13Q8NGP0 309 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 C17orf50Q8WW18 174 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 PPP1R14AQ96A00 147 aa5.37□□□□□ -1.55
SLIRP-203ENST00000554074 RNFT2Q96EX2 444 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms