RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TCP1P17987 556 aaKnown RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 RAB4AP20338 218 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 GPX4P36969 197 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TALDO1P37837 337 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 NMUP48645 174 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 HCAR3P49019 387 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TDGF1P3P51864 188 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 PPP1CBP62140 327 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 SLC7A9P82251 487 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 HMGCS1Q01581 520 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 MXD1Q05195 221 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ERCC8Q13216 396 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF266Q14584 549 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TSC22D1Q15714 1073 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ZBTB6Q15916 424 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 IGFBP7Q16270 282 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 LINC00303Q3SY05 128 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 HES3Q5TGS1 186 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CTRB2Q6GPI1 263 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CLEC18BQ6UXF7 455 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 FAM122BQ7Z309 247 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR2W3Q7Z3T1 314 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ZBTB8OSQ8IWT0 167 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 BLIDQ8IZY5 108 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR8U1Q8NH10 309 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR51F2Q8NH61 342 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CCDC12Q8WUD4 166 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TM4SF18Q96CE8 201 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 SCGB3A2Q96PL1 93 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CCDC94Q9BW85 323 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 UGT1A7Q9HAW7 530 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 UGT1A8Q9HAW9 530 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 MYOZ1Q9NP98 299 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 OR12D3Q9UGF7 316 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ST3GAL6Q9Y274 331 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TRAPPC4Q9Y296 219 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 MRPS18BQ9Y676 258 aaKnown RBP2.07□□□□□ -2.08
SCFD1-210ENST00000553693 TSC2P49815 1807 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 CEP192Q8TEP8 1941 aa2.07□□□□□ -2.08
SCFD1-210ENST00000553693 ABCA12Q86UK0 2595 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 GOLGA4Q13439 2230 aaKnown RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 COL6A6A6NMZ7 2263 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CELSR2Q9HCU4 2923 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SLC22A20A6NK97 555 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SEC14L6B5MCN3 397 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 HSBP1L1C9JCN9 74 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 H3BN98 237 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 KDELR3O43731 214 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SUPT3HO75486 399 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SMC2O95347 1197 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 LDOC1O95751 146 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 NPPAP01160 153 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 PTHP01270 115 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 GCGP01275 180 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CXCL8P10145 99 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 FOLR1P15328 257 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF30P17039 623 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 PRKACBP22694 351 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SPAM1P38567 509 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CSKP41240 450 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CDKN2BP42772 138 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 RANBP1P43487 201 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 NCBP2P52298 156 aaKnown RBP eCLIP2.06□□□□□ -2.086e-13■■□□□ 13
SCFD1-210ENST00000553693 FGF8P55075 233 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 HADHBP55084 474 aaKnown RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TAS2R60P59551 318 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ATP6V0D1P61421 351 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 SLC35B1P78383 322 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 REG3AQ06141 175 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 RCAN2Q14206 197 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 GPR176Q14439 515 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF726P1Q15940 193 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 POU2AF1Q16633 256 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 GUCA2BQ16661 112 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ATP6V1FQ16864 119 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM183BQ1AE95 376 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 RPEL1Q2QD12 228 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CHRFAM7AQ494W8 412 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 C5orf47Q569G3 176 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 PIGGQ5H8A4 983 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 METTL21CQ5VZV1 264 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 WDR82Q6UXN9 313 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 LINC00173Q6ZV60 143 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 PID1Q7Z2X4 250 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM25Q86YD3 366 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 RBM45Q8IUH3 476 aaKnown RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM183AQ8IXX5 376 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 KIF2BQ8N4N8 673 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 OR6N2Q8NGY6 317 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 NDNFQ8TB73 568 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TMEM158Q8WZ71 300 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 NRBF2Q96F24 287 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 BMFQ96LC9 184 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 NAA50Q9GZZ1 169 aaKnown RBP2.06□□□□□ -2.08
SCFD1-210ENST00000553693 OR2AG1Q9H205 316 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TPK1Q9H3S4 243 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 KIR3DX1Q9H7L2 352 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 EDA2RQ9HAV5 297 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ANKHQ9HCJ1 492 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ISYNA1Q9NPH2 558 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms