RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 BHLHE23Q8NDY6 225 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR51A2Q8NGJ7 313 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR51F2Q8NH61 342 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TBC1D15Q8TC07 691 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SSC4DQ8WTU2 575 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM171Q8WVE6 324 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TNFAIP8L1Q8WVP5 186 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR5P3Q8WZ94 311 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FAM46BQ96A09 425 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 PIK3IP1Q96FE7 263 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 DHRS9Q9BPW9 319 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 PKIBQ9C010 78 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 EGLN1Q9GZT9 426 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ATG5Q9H1Y0 275 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 POFUT1Q9H488 388 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ELL3Q9HB65 397 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 CA10Q9NS85 328 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 DECR2Q9NUI1 292 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 RASL12Q9NYN1 266 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 IL19Q9UHD0 177 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 GLS2Q9UI32 602 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 POLDIP2Q9Y2S7 368 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SPEGQ15772 3267 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TLN1Q9Y490 2541 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 A0A1B0GWJ7 208 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PQLC2LA1A4F0 135 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 SMIM30A4D0T7 59 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A10PA6NDY2 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A20PA6NIJ5 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A7PA6NKC0 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A22PA8MWA6 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A12PA8MX19 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A23PA8MXZ1 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 SHISA9B4DS77 424 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 J3QKU1 62 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 M0R233 179 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 SULT1C2O00338 296 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 AKR7A2O43488 359 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 XRCC3O43542 346 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 HPGDSO60760 199 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 CRTAPO75718 401 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 C1QL1O75973 258 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A15PP0C7V4 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A14PP0C7W9 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 IRF2P14316 349 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 S100A1P23297 94 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 CPT2P23786 658 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 CD200P41217 278 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 MNDAP41218 407 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PITPNBP48739 271 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 INPP1P49441 399 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 GPM6AP51674 278 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 TNFAIP6P98066 277 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 IL18Q14116 193 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 P2RY14Q15391 338 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 EFNB3Q15768 340 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ADIPOQQ15848 244 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PCGF3Q3KNV8 242 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF672Q499Z4 452 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PRR14LQ5THK1 2151 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 AGAP6Q5VW22 663 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 THOC7Q6I9Y2 204 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ELP2Q6IA86 826 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ASPHD2Q6ICH7 369 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 PYHIN1Q6K0P9 492 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 MEX3BQ6ZN04 569 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 Q6ZTK2 550 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 LINC00596Q86U02 117 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 CCDC190Q86UF4 302 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 LYPD6Q86Y78 171 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 LDLRAD3Q86YD5 345 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OSR2Q8N2R0 312 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 GDPD1Q8N9F7 314 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ZBTB8BQ8NAP8 495 aaPredicted RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR2Z1Q8NG97 314 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR56B1Q8NGI3 324 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR4D6Q8NGJ1 314 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR51T1Q8NGJ9 327 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR11L1Q8NGX0 322 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR10Z1Q8NGY1 313 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 NPRL2Q8WTW4 380 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 BORCS5Q969J3 196 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 SLC25A28Q96A46 364 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 C16orf92Q96LL3 132 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 NEDD4LQ96PU5 975 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 GFI1Q99684 422 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 NUDT16L1Q9BRJ7 211 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 ADAT1Q9BUB4 502 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM59Q9BXS4 323 aa4.25□□□□□ -1.73
VTI1B-202ENST00000553619 MRPL37Q9BZE1 423 aaKnown RBP4.25□□□□□ -1.73
VTI1B-202ENST00000553619 OR51I2Q9H344 312 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms