RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SLC25A10Q9UBX3 287 aaPredicted RBP9.63□□□□□ -0.87
SRP54-203ENST00000553544 RPL36Q9Y3U8 105 aaKnown RBP9.63□□□□□ -0.87
SRP54-203ENST00000553544 HSPE1-MOB4S4R3N1 261 aa9.63□□□□□ -0.87
SRP54-203ENST00000553544 MEIOCA2RUB1 952 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 NKX6-3A6NJ46 265 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 J3QT63 122 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 SYNGR1O43759 233 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 FADS2O95864 444 aaKnown RBP9.62□□□□□ -0.87
SRP54-203ENST00000553544 PEX2P28328 305 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 HAAOP46952 286 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 ERVK11-1P61568 191 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 SLC34A1Q06495 639 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
SRP54-203ENST00000553544 ACP7Q6ZNF0 438 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 KCTD20Q7Z5Y7 419 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 DHRSXQ8N5I4 330 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 ZNRF1Q8ND25 227 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 OR4C13Q8NGP0 309 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 PPP1R35Q8TAP8 253 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 RNFT2Q96EX2 444 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 ZNF488Q96MN9 340 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 MBOAT4Q96T53 435 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 SLC29A1Q99808 456 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 NRIP2Q9BQI9 281 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 HES4Q9HCC6 221 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 FAM118AQ9NWS6 357 aa9.62□□□□□ -0.87
SRP54-203ENST00000553544 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
SRP54-203ENST00000553544 COL7A1Q02388 2944 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 A0A1W2PRD5 423 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 A0A1W2PRF3 423 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 A0A1W2PRM7 423 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 RFPL4AA6NLU0 287 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 RFPL4AL1F8VTS6 287 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 H0YAE9 185 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 SYT7O43581 403 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 VSIG10L2P0DP72 767 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 KIR3DL2P43630 455 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 GABRA2P47869 451 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 ACSM1Q08AH1 577 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 RAB40BQ12829 278 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 LRRC36Q1X8D7 754 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 ODF4Q2M2E3 257 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 TP53I3Q53FA7 332 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 KLHL22Q53GT1 634 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 OGFRL1Q5TC84 451 aaPredicted RBP9.61□□□□□ -0.87
SRP54-203ENST00000553544 LPCAT4Q643R3 524 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 FDX2Q6P4F2 183 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 CALHM1Q8IU99 346 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 ENTHD1Q8IYW4 607 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 ACBD7Q8N6N7 88 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 CD177Q8N6Q3 437 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 CYGBQ8WWM9 190 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 PHF21AQ96BD5 680 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 C10orf35Q96D05 121 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 PKIBQ9C010 78 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 RAB18Q9NP72 206 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 SIRT7Q9NRC8 400 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 AASSQ9UDR5 926 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 POLDIP2Q9Y2S7 368 aa9.61□□□□□ -0.87
SRP54-203ENST00000553544 RYR3Q15413 4870 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 H0YJX3 145 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 H3BUX3 64 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 M0R1W7 72 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 MPIG6BO95866 241 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 ISG15P05161 165 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 UBCP0CG48 685 aaKnown RBP9.6□□□□□ -0.87
SRP54-203ENST00000553544 NDUFB7P17568 137 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 PRDX2P32119 198 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 HSPA13P48723 471 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 UBE2E1P51965 193 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 OR12D2P58182 307 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 IL24Q13007 206 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 SMIM21Q3B7S5 101 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 DEFB121Q5J5C9 76 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 FOXB2Q5VYV0 432 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 ANGPTL5Q86XS5 388 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 RDH10Q8IZV5 341 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 C8orf59Q8N0T1 100 aaPredicted RBP9.6□□□□□ -0.87
SRP54-203ENST00000553544 LYG1Q8N1E2 194 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 OR2G2Q8NGZ5 317 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 RHOXF1Q8NHV9 184 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
SRP54-203ENST00000553544 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 SSX3Q99909 188 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 ADI1Q9BV57 179 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 CHST5Q9GZS9 411 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 ELL3Q9HB65 397 aaPredicted RBP9.6□□□□□ -0.87
SRP54-203ENST00000553544 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 GNG8Q9UK08 70 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 BOLA1Q9Y3E2 137 aa9.6□□□□□ -0.87
SRP54-203ENST00000553544 IGKV1-27A0A075B6S5 117 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 TRBV23-1A0A0A0MS06 115 aa9.59□□□□□ -0.87
SRP54-203ENST00000553544 LOC107986453A0A1B0GWG9 222 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms