RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 IL36RNQ9UBH0 155 aa15.81■□□□□ 0.12
PTCH1-227ENST00000553256 CAB39Q9Y376 341 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-227ENST00000553256 K7N7A8 449 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 M0R1W7 72 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 OGG1O15527 345 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 PIPP12273 146 aaPredicted RBP15.8■□□□□ 0.12
PTCH1-227ENST00000553256 CDK5R1Q15078 307 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 CCDC58Q4VC31 144 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 Q6YL49 198 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 ZNF676Q8N7Q3 588 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 SETD9Q8NE22 299 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 LHX4Q969G2 390 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 SLAMF9Q96A28 289 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 AJUBAQ96IF1 538 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 OPALINQ96PE5 141 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 FAM234AQ9H0X4 552 aa15.8■□□□□ 0.12
PTCH1-227ENST00000553256 TRRAPQ9Y4A5 3859 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 TMEM82A0PJX8 343 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 TK1P04183 234 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 CCDC159P0C7I6 412 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 NDUFB7P17568 137 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 PRKACBP22694 351 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 GBX2P52951 348 aaPredicted RBP15.79■□□□□ 0.12
PTCH1-227ENST00000553256 ATP1B3P54709 279 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 DLX6P56179 175 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 ZP1P60852 638 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 PDZK1IP1Q13113 114 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 BAMBIQ13145 260 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 RPL22L1Q6P5R6 122 aaKnown RBP15.79■□□□□ 0.12
PTCH1-227ENST00000553256 LHFPL2Q6ZUX7 228 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 TMEM185AQ8NFB2 350 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 OR13C3Q8NGS6 347 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 OR13C9Q8NGT0 318 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 OR5AK2Q8NH90 309 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 DUX5Q96PT3 197 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 ZCCHC4Q9H5U6 513 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 ZMAT3Q9HA38 289 aaKnown RBP15.79■□□□□ 0.12
PTCH1-227ENST00000553256 SIRT7Q9NRC8 400 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 RBFOX1Q9NWB1 397 aaKnown RBP15.79■□□□□ 0.12
PTCH1-227ENST00000553256 PSORS1C1Q9UIG5 152 aa15.79■□□□□ 0.12
PTCH1-227ENST00000553256 TRBV2A0A0J9YWF9 115 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 KDM4BO94953 1096 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 PRB3Q04118 309 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-227ENST00000553256 SLC34A1Q06495 639 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 ZNF146Q15072 292 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 TMEM200BQ69YZ2 307 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 DMKNQ6E0U4 476 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-227ENST00000553256 C17orf107Q6ZR85 190 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 TCF23Q7RTU1 214 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 LDLRAD3Q86YD5 345 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 OR52N1Q8NH53 320 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 GATAD2BQ8WXI9 593 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 H1FXQ92522 213 aaKnown RBP15.78■□□□□ 0.12
PTCH1-227ENST00000553256 TMEM80Q96HE8 168 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 NOX4Q9NPH5 578 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 BABAM2Q9NXR7 383 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 CNOT2Q9NZN8 540 aaKnown RBP15.78■□□□□ 0.12
PTCH1-227ENST00000553256 ONECUT1Q9UBC0 465 aa15.78■□□□□ 0.12
PTCH1-227ENST00000553256 EXOSC1Q9Y3B2 195 aaKnown RBP15.78■□□□□ 0.12
PTCH1-227ENST00000553256 A0A0U1RQK1 487 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 IRGMA1A4Y4 181 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 H0YJX3 145 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 XPNPEP2O43895 674 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 MELTFP08582 738 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.12
PTCH1-227ENST00000553256 HKR1P10072 659 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 ZNF20P17024 532 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 BCL3P20749 454 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 MTCP1P56278 107 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 RPS11P62280 158 aaKnown RBP eCLIP15.77■□□□□ 0.12
PTCH1-227ENST00000553256 COL10A1Q03692 680 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 RBMS3Q6XE24 437 aaKnown RBP15.77■□□□□ 0.12
PTCH1-227ENST00000553256 PGLYRP3Q96LB9 341 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 SPACA5Q96QH8 159 aa15.77■□□□□ 0.12
PTCH1-227ENST00000553256 SLC1A7O00341 560 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 HOXA3O43365 443 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-227ENST00000553256 SPRY1O43609 319 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-227ENST00000553256 CHRM2P08172 466 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 ST3GAL4Q11206 333 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 KLRD1Q13241 179 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 ZNF273Q14593 569 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 SERPINA12Q8IW75 414 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 Q8IYB0 196 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 CMTM4Q8IZR5 234 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 C8orf59Q8N0T1 100 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-227ENST00000553256 TMEM86BQ8N661 226 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 OR52N4Q8NGI2 321 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 OR51A2Q8NGJ7 313 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 SMIM19Q96E16 107 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 METTL8Q9H825 291 aaKnown RBP15.76■□□□□ 0.11
PTCH1-227ENST00000553256 HMG20AQ9NP66 347 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 OR14J1Q9UGF5 321 aa15.76■□□□□ 0.11
PTCH1-227ENST00000553256 TRBV5-5A0A0J9YX44 114 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 SULT1B1O43704 296 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 ANGPTL7O43827 346 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 PSPNO60542 156 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 C21orf33P30042 268 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-227ENST00000553256 UBE2E1P51965 193 aa15.75■□□□□ 0.11
PTCH1-227ENST00000553256 RPL31P62899 125 aaKnown RBP15.75■□□□□ 0.11
PTCH1-227ENST00000553256 PDZD9Q8IXQ8 264 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms