RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ARRDC5A6NEK1 342 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 M0QZK8 103 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 PSMD9O00233 223 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 INMTO95050 263 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 NRASP01111 189 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 IGHA1P01876 353 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 LYNP07948 512 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 MPZP25189 248 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 IFNGR2P38484 337 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 SMIM11AP58511 58 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 TPTE2P1Q5T6R2 138 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 GLYATQ6IB77 296 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 ZBTB49Q6ZSB9 765 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 ASRGL1Q7L266 308 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 SHFQ7M4L6 423 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 C5orf56Q8N8D9 126 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 OR8U1Q8NH10 309 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 OTOSQ8NHW6 89 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 OR51E1Q8TCB6 317 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 SIKE1Q9BRV8 207 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 ZNF286AQ9HBT8 521 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 IL36RNQ9UBH0 155 aa10.12□□□□□ -0.79
VPS29-211ENST00000553128 A6NIN4 97 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 LEUTXA8MZ59 168 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 SOX14O95416 240 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 GASTP01350 101 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 IGLV3-1P01715 115 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 HCKP08631 526 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 BLVRAP53004 296 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 RIPPLY1Q0D2K3 151 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 KIR2DS1Q14954 304 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 ZNF684Q5T5D7 378 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 CGB2Q6NT52 195 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 RPL13AP3Q6NVV1 102 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 C16orf89Q6UX73 402 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 COMMD2Q86X83 199 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 ZNF573Q86YE8 665 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 STPG2Q8N412 459 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 OTULINQ96BN8 352 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 ATP6V1G3Q96LB4 118 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 TEAD3Q99594 435 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 GPR84Q9NQS5 396 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 FAM206AQ9NX38 181 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 SAMD4AQ9UPU9 718 aaKnown RBP10.11□□□□□ -0.79
VPS29-211ENST00000553128 POLDIP2Q9Y2S7 368 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 DNAH10Q8IVF4 4471 aa10.11□□□□□ -0.79
VPS29-211ENST00000553128 A0A0U1RQV5 110 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A18PA6NE21 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A16PA6NEW6 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A20PA6NIJ5 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A12PA8MX19 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A5PA8MXJ8 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 BUB1B-PAK6H3BSN5 160 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 PSPNO60542 156 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A15PP0C7V4 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A13PP0C7W8 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A14PP0C7W9 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 FAM90A24PP0C7X0 464 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 CDK2P24941 298 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 HCCSP53701 268 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 SLC35B1P78383 322 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 GRK1Q15835 563 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 SLC35E3Q7Z769 313 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 ZNF596Q8TC21 504 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 ISOC1Q96CN7 298 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 PYURFQ96I23 114 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 SNX22Q96L94 193 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 TM2D3Q9BRN9 247 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 PBOV1Q9GZY1 135 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 OR51V1Q9H2C8 321 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 ENPP5Q9UJA9 477 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
VPS29-211ENST00000553128 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 TRIM64CA6NLI5 447 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 PRR32B1ATL7 298 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 GSC2O15499 205 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 IGHG2P01859 326 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 CBX1P83916 185 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 PPP1R8Q12972 351 aaKnown RBP10.09□□□□□ -0.79
VPS29-211ENST00000553128 FHL3Q13643 280 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 RBM39Q14498 530 aaKnown RBP10.09□□□□□ -0.79
VPS29-211ENST00000553128 HNF4GQ14541 408 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 TRAPPC6BQ86SZ2 158 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 COMMD1Q8N668 190 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 IQCF1Q8N6M8 205 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 OR2T33Q8NG76 320 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 OR56B4Q8NH76 319 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 TRMT10AQ8TBZ6 339 aaKnown RBP10.09□□□□□ -0.79
VPS29-211ENST00000553128 HOPXQ9BPY8 73 aaPredicted RBP10.09□□□□□ -0.79
VPS29-211ENST00000553128 CMC2Q9NRP2 79 aa10.09□□□□□ -0.79
VPS29-211ENST00000553128 ABCD2Q9UBJ2 740 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms