RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 RNLSQ5VYX0 342 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 CMTM4Q8IZR5 234 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 FGFRL1Q8N441 504 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF561Q8N587 486 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNRF1Q8ND25 227 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 OR5D18Q8NGL1 313 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 UPRTQ96BW1 309 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 GPER1Q99527 375 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 PCGF1Q9BSM1 259 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 TAS2R4Q9NYW5 299 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 CKLFQ9UBR5 152 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 NUP50Q9UKX7 468 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 MAB21L2Q9Y586 359 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 TRAV40A0A0B4J280 105 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 A0A1W2PQ09 198 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 RGS10O43665 173 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 TOX4O94842 621 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 FSHBP01225 129 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 CELP19835 753 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 CEBPDP49716 269 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 SLC35A2P78381 396 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 PDZK1IP1Q13113 114 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 Q499Y3 187 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 OR13C5Q8NGS8 318 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF184Q99676 751 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 DCTN5Q9BTE1 182 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 CDCA4Q9BXL8 241 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 CCDC90BQ9GZT6 254 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 CNTD2Q9H8S5 307 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 ONECUT1Q9UBC0 465 aa15.29■□□□□ 0.04
PRPF40B-216ENST00000552301 ANGPTL7O43827 346 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 FCN3O75636 299 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 TMEM225BP0DP42 221 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 BCL3P20749 454 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 ARF6P62330 175 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 BDH1Q02338 343 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 KISS1Q15726 138 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 GPR157Q5UAW9 335 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 FAM58AQ8N1B3 248 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 CD177Q8N6Q3 437 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 ASCC1Q8N9N2 400 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 THRSPQ92748 146 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 PGLYRP3Q96LB9 341 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 SUCNR1Q9BXA5 334 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 MS4A7Q9GZW8 240 aaPredicted RBP15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 RBFOX1Q9NWB1 397 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 PAK1IP1Q9NWT1 392 aaPredicted RBP15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 GLS2Q9UI32 602 aa15.28■□□□□ 0.04
PRPF40B-216ENST00000552301 IGHV3OR16-10A0A075B7F0 116 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 TRBV23-1A0A0A0MS06 115 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 TRBV5-5A0A0J9YX44 114 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 F8VVB4 439 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 F8VWA3 439 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 CHRM2P08172 466 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 PRKACAP17612 351 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 EEF1B2P24534 225 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 SPHARQ15513 63 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 MED22Q15528 200 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 RBM48Q5RL73 367 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 SAXO1Q8IYX7 474 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 FAM185AQ8N0U4 392 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 ZSCAN4Q8NAM6 433 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 OR51A2Q8NGJ7 313 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 C22orf15Q8WYQ4 148 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 SGCDQ92629 289 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 DMRTB1Q96MA1 342 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 WDFY2Q96P53 400 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 SLC6A7Q99884 636 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 FAM192AQ9GZU8 254 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 DUSP21Q9H596 190 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 ELL3Q9HB65 397 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 TMEM138Q9NPI0 162 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 KPTNQ9Y664 436 aa15.27■□□□□ 0.04
PRPF40B-216ENST00000552301 RGS9O75916 674 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 CRHBPP24387 322 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 MAPK3P27361 379 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 NPBWR2P48146 333 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 SNU13P55769 128 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 KLF17Q5JT82 389 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 RBMS3Q6XE24 437 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 C8orf46Q8TAG6 207 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 TNFAIP8L1Q8WVP5 186 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 OR14A2Q96R54 314 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 FAM234AQ9H0X4 552 aa15.26■□□□□ 0.03
PRPF40B-216ENST00000552301 A0A0A6YYJ9 748 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 KDM4BO94953 1096 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 HAND1O96004 215 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 CD1AP06126 327 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 SFTPBP07988 381 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 IGHV4-38-2P0DP08 117 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 BDKRB2P30411 391 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 COL10A1Q03692 680 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 ACSM1Q08AH1 577 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 BLMHQ13867 455 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 PDCD1Q15116 288 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 SPIN3Q5JUX0 258 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 DDI2Q5TDH0 399 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 ZNF529Q6P280 563 aa15.25■□□□□ 0.03
PRPF40B-216ENST00000552301 PRSS48Q7RTY5 328 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms