RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 HAAOP46952 286 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 PDCD1Q15116 288 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ELP2Q6IA86 826 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 OR5L1Q8NGL2 311 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 PPP1R1CQ8WVI7 109 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 DYRK2Q92630 601 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 CITED4Q96RK1 184 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A10PA6NDY2 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A18PA6NE21 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A16PA6NEW6 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A20PA6NIJ5 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A8PA6NJQ4 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A7PA6NKC0 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A22PA8MWA6 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A12PA8MX19 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A5PA8MXJ8 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A23PA8MXZ1 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 TM4SF5O14894 197 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A15PP0C7V4 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A13PP0C7W8 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A14PP0C7W9 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM90A24PP0C7X0 464 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 OR5H8P0DN80 308 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 BCL3P20749 454 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 IGHV1-2P23083 117 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 SERPINF1P36955 418 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 NOVA1P51513 510 aaKnown RBP12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 RTP5Q14D33 572 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 GSG1LQ6UXU4 331 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 RFPL4BQ6ZWI9 263 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 SLAMF9Q96A28 289 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 NECAP2Q9NVZ3 263 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 C14orf166Q9Y224 244 aaKnown RBP12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 CELSR3Q9NYQ7 3312 aa12.04□□□□□ -0.48
RAB3IP-216ENST00000552199 C5orf51A6NDU8 294 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 LEUTXA8MZ59 168 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 EEF1E1-BLOC1S5C9J1V9 151 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 RPS2P15880 293 aaKnown RBP12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 NBL1P41271 181 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 RAB14P61106 215 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 TGFBR3Q03167 851 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 TBC1D28Q2M2D7 210 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 NHLRC3Q5JS37 347 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 TMEM211Q6ICI0 200 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 MKXQ8IYA7 352 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 BATF2Q8N1L9 274 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 OR6K3Q8NGY3 331 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 COQ8AQ8NI60 647 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 OR5P3Q8WZ94 311 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 RAB18Q9NP72 206 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 DLL3Q9NYJ7 618 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 TNFSF18Q9UNG2 199 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 MPC1Q9Y5U8 109 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 AUP1Q9Y679 476 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 A0A0D9SG52 128 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 FAM221AA4D161 298 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 TUBAL3A6NHL2 446 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 ANKRD30BLA7E2S9 258 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 PRSS44E7EML9 344 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 OR7C1O76099 320 aaPredicted RBP12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 FGF12P61328 243 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 ESCO2Q56NI9 601 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 CCDC36Q8IYA8 594 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 BHLHE23Q8NDY6 225 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 SARAFQ96BY9 339 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 NMES1Q9C002 83 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 OR51B6Q9H340 312 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 RDH8Q9NYR8 311 aa12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 CNOT1A5YKK6 2376 aaKnown RBP12.03□□□□□ -0.48
RAB3IP-216ENST00000552199 LILRA1O75019 489 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 B3GALNT1O75752 331 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 UBE2NP61088 152 aaKnown RBP12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 OR5M9Q8NGP3 310 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 WNT2BQ93097 391 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 LIME1Q9H400 295 aa12.02□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF442Q9H7R0 627 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms