RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 SPATA3Q8NHX4 192 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 CNIH3Q8TBE1 160 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 EMG1Q92979 244 aaKnown RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 LHX4Q969G2 390 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 SLAMF9Q96A28 289 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 UPRTQ96BW1 309 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 PELI1Q96FA3 418 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 CPNE2Q96FN4 548 aaPredicted RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 TMEM80Q96HE8 168 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 CEP19Q96LK0 163 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 ZNF488Q96MN9 340 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 WDFY2Q96P53 400 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 OPALINQ96PE5 141 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 GPER1Q99527 375 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 PKIBQ9C010 78 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 WDR12Q9GZL7 423 aaKnown RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 CHST5Q9GZS9 411 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 FGF23Q9GZV9 251 aaPredicted RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 VCX3BQ9H321 246 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 IFT22Q9H7X7 185 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 ISG20L2Q9H9L3 353 aaKnown RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 SMURF1Q9HCE7 757 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 FGF20Q9NP95 211 aaPredicted RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 RPUSD1Q9UJJ7 312 aaKnown RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 DHDHQ9UQ10 334 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 CAB39Q9Y376 341 aaPredicted RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 EXOSC1Q9Y3B2 195 aaKnown RBP4.89□□□□□ -1.63
CCDC65-204ENST00000552188 FAM96BQ9Y3D0 163 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 KPTNQ9Y664 436 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 HSPE1-MOB4S4R3N1 261 aa4.89□□□□□ -1.63
CCDC65-204ENST00000552188 DSCAML1Q8TD84 2053 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 A0A1B0GW55 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 PQLC2LA1A4F0 135 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 EFCAB10A6NFE3 127 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 RFPL4AA6NLU0 287 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 OR4C45A6NMZ5 311 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 C22orf46C9J442 243 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 E9PQ18 207 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 RFPL4AL1F8VTS6 287 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 MYL12BO14950 172 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SIGLEC5O15389 551 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 NOS1APO75052 506 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 TFF1P04155 84 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SFTPBP07988 381 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 CHRM2P08172 466 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L2P0CJ85 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L3P0CJ86 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L4P0CJ87 422 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L5P0CJ88 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L6P0CJ89 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L7P0CJ90 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 IGHV4-38-2P0DP08 117 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 PRKACAP17612 351 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 AZGP1P25311 298 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SNU13P55769 128 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 CAV3P56539 151 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 HILS1P60008 231 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 NANOS3P60323 173 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ISL1P61371 349 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ELF3P78545 371 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ADARB1P78563 741 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 PAX2Q02962 417 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ST3GAL4Q11206 333 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 IL24Q13007 206 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DGUOKQ16854 277 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 KLF17Q5JT82 389 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 OGFRL1Q5TC84 451 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 TMEM42Q69YG0 159 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 RPL22L1Q6P5R6 122 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4L9Q6RFH8 374 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 C12orf54Q6X4T0 127 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 BRD3OSQ6XYD6 125 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 Q6ZSR3 168 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SLC25A26Q70HW3 274 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 UTS2BQ765I0 119 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 GDPD3Q7L5L3 318 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 KRT74Q7RTS7 529 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 VMO1Q7Z5L0 202 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SATL1Q86VE3 508 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 CALHM1Q8IU99 346 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 PDZD9Q8IXQ8 264 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 Q8IYB0 196 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 BCL6BQ8N143 479 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ZNF561Q8N587 486 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ASCC1Q8N9N2 400 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ZNRF1Q8ND25 227 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DNAAF1Q8NEP3 725 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 BPIFB6Q8NFQ5 453 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 OR5D14Q8NGL3 314 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 OR13C9Q8NGT0 318 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ANGPTL6Q8NI99 470 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 PPP1R35Q8TAP8 253 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 TBC1D15Q8TC07 691 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ZFAND2BQ8WV99 257 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 APH1BQ8WW43 257 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 GCDHQ92947 438 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SLC25A28Q96A46 364 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 RFT1Q96AA3 541 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms