RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 HAGHLQ6PII5 290 aaPredicted RBP17.97■□□□□ 0.47
PRDM4-205ENST00000550376 OR5AP2Q8NGF4 316 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 PCNPQ8WW12 178 aaKnown RBP17.97■□□□□ 0.47
PRDM4-205ENST00000550376 NANOS1Q8WY41 292 aaKnown RBP17.97■□□□□ 0.47
PRDM4-205ENST00000550376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRDM4-205ENST00000550376 PLSCR2Q9NRY7 297 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 SELEP16581 610 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 CXCL2P19875 107 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 LRRC37A5PQ49AS3 106 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 VAX1Q5SQQ9 334 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 ITGB1BP2Q9UKP3 347 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 RELNP78509 3460 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 CADP27708 2225 aa17.97■□□□□ 0.47
PRDM4-205ENST00000550376 RAP2BP61225 183 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 SORDQ00796 357 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 TBC1D28Q2M2D7 210 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 Q6ZPA2 131 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 C17orf78Q8N4C9 275 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 PXT1Q8NFP0 134 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 GPR137Q96N19 417 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 SCNM1Q9BWG6 230 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 PPA2Q9H2U2 334 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 LIME1Q9H400 295 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 GLRX2Q9NS18 164 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 FXYD6-FXYD2A0A087WZ82 144 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 MPC2O95563 127 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 MPZP25189 248 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 RBM11P57052 281 aaKnown RBP17.96■□□□□ 0.47
PRDM4-205ENST00000550376 SLC9A3R2Q15599 337 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 GRK1Q15835 563 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 OVCH2Q7RTZ1 564 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 LYG2Q86SG7 212 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 WNT2BQ93097 391 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 ELMOD3Q96FG2 381 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 FXYD6Q9H0Q3 95 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 HEXA-AS1Q9H8Q6 139 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 LHX6Q9UPM6 363 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 SHANK1Q9Y566 2161 aa17.96■□□□□ 0.47
PRDM4-205ENST00000550376 ARPC5O15511 151 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 TNFSF13O75888 250 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 TBPP20226 339 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 CBX5P45973 191 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 CXorf67Q86X51 503 aaPredicted RBP17.95■□□□□ 0.46
PRDM4-205ENST00000550376 FAM219AQ8IW50 185 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 ZDHHC22Q8N966 263 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 TMEM230Q96A57 120 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 MARS2Q96GW9 593 aaKnown RBP17.95■□□□□ 0.46
PRDM4-205ENST00000550376 HIST1H2AAQ96QV6 131 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 ZNF442Q9H7R0 627 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 FZR1Q9UM11 496 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 TLN1Q9Y490 2541 aaKnown RBP17.95■□□□□ 0.46
PRDM4-205ENST00000550376 ANKRD30BLA7E2S9 258 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 RHBDL1O75783 438 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 CST4P01036 141 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 KNG1P01042 644 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 HTR2BP41595 481 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 ARPC4P59998 168 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 HOXA4Q00056 320 aaPredicted RBP17.95■□□□□ 0.46
PRDM4-205ENST00000550376 IGFL3Q6UXB1 125 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 Q6ZS92 163 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 RTBDNQ9BSG5 229 aaPredicted RBP17.95■□□□□ 0.46
PRDM4-205ENST00000550376 GPR132Q9UNW8 380 aa17.95■□□□□ 0.46
PRDM4-205ENST00000550376 OR5P3Q8WZ94 311 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 STARD4Q96DR4 205 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 PCNX1Q96RV3 2341 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 PLSCR5A0PG75 271 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 SMPD2O60906 423 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 FCGR3AP08637 254 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 AP2S1P53680 142 aaPredicted RBP17.94■□□□□ 0.46
PRDM4-205ENST00000550376 ZBTB37Q5TC79 503 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 RTL6Q6ICC9 239 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 ARRDC1Q8N5I2 433 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 WDR31Q8NA23 367 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 ZNF2Q9BSG1 426 aaPredicted RBP17.94■□□□□ 0.46
PRDM4-205ENST00000550376 CDH20Q9HBT6 801 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 KALRNO60229 2985 aa17.94■□□□□ 0.46
PRDM4-205ENST00000550376 PPP1CBP62140 327 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 ABHD17AQ96GS6 310 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 ZNF71Q9NQZ8 489 aaPredicted RBP17.93■□□□□ 0.46
PRDM4-205ENST00000550376 ANXA10Q9UJ72 324 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 CFDP00746 253 aaPredicted RBP17.93■□□□□ 0.46
PRDM4-205ENST00000550376 PPP3CBP16298 524 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 SLC25A40Q8TBP6 338 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 TECTBQ96PL2 329 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 OSGIN2Q9Y236 505 aa17.93■□□□□ 0.46
PRDM4-205ENST00000550376 KCNAB3O43448 404 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 WDR1O75083 606 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 NFYAP23511 347 aaPredicted RBP17.92■□□□□ 0.46
PRDM4-205ENST00000550376 TAS2R46P59540 309 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 OR5L1Q8NGL2 311 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 OR1J1Q8NGS3 322 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 PDCD10Q9BUL8 212 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 MYOZ1Q9NP98 299 aaPredicted RBP17.92■□□□□ 0.46
PRDM4-205ENST00000550376 IL36GQ9NZH8 169 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 HSF4Q9ULV5 492 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 ICE1Q9Y2F5 2266 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 C13orf42A0A1B0GVH6 325 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 AHRRA9YTQ3 701 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 EEF1E1-BLOC1S5C9J1V9 151 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 PDCD6O75340 191 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms