RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 EDDM3BP56851 147 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 IL18R1Q13478 541 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 DCTN2Q13561 401 aaKnown RBP7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 C16orf89Q6UX73 402 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 ANGPTL5Q86XS5 388 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 DEFB107AQ8IZN7 70 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 LINC00482Q8N8I6 264 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 ASB17Q8WXJ9 295 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 TMEM133Q9H2Q1 129 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 TAS2R1Q9NYW7 299 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 TAGLN3Q9UI15 199 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 TMEM14AQ9Y6G1 99 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 SESN1Q9Y6P5 492 aa7.86□□□□□ -1.15
TRAFD1-207ENST00000550051 IGHV2-26A0A0B4J1V2 119 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 A0A1B0GTI1 187 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 PSMD9O00233 223 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 SNX3O60493 162 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 DNAJC8O75937 253 aaPredicted RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 AMY1AP04745 511 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 AMY2AP04746 511 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 OSMP13725 252 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ATP6V1B2P21281 511 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 BRS3P32247 399 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 RIDAP52758 137 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ZNF829Q3KNS6 432 aaPredicted RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 FAM98BQ52LJ0 330 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ASRGL1Q7L266 308 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 TCF23Q7RTU1 214 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 COMMD2Q86X83 199 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ELMOD2Q8IZ81 293 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ARHGAP24Q8N264 748 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ZNF676Q8N7Q3 588 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ASCC1Q8N9N2 400 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 BBS1Q8NFJ9 593 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 OR4X2Q8NGF9 303 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 OR14K1Q8NGZ2 314 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 NDNFQ8TB73 568 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 STMN2Q93045 179 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 RBM14Q96PK6 669 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 CLEC7AQ9BXN2 247 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 GPR173Q9NS66 373 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ARL8BQ9NVJ2 186 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 MTCH1Q9NZJ7 389 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 DPM3Q9P2X0 92 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 ZMAT5Q9UDW3 170 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 HHLA2Q9UM44 414 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 LINC00312Q9Y6C7 94 aa7.85□□□□□ -1.15
TRAFD1-207ENST00000550051 DNAH9Q9NYC9 4486 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 TMEM82A0PJX8 343 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 PRR32B1ATL7 298 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 F8VVB4 439 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 F8VWA3 439 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 OR2F2O95006 317 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 LPLP06858 475 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 ERP29P30040 261 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 HOXD3P31249 432 aaPredicted RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 ACTR3P61158 418 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 RPS7P62081 194 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 BDH1Q02338 343 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 APOFQ13790 326 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 TRIM25Q14258 630 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 ABCA11PQ4W5N1 156 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 OR52W1Q6IF63 320 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 RTN4RL2Q86UN3 420 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 DHFR2Q86XF0 187 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 MRPL41Q8IXM3 137 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 OR4P4Q8NGL7 312 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 CAPSLQ8WWF8 208 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 DPF1Q92782 380 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 CEP19Q96LK0 163 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 MCRIP2Q9BUT9 160 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 MOB1AQ9H8S9 216 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 ZNF446Q9NWS9 450 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 UBE2J1Q9Y385 318 aaPredicted RBP7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 RYR3Q15413 4870 aa7.84□□□□□ -1.15
TRAFD1-207ENST00000550051 MEX3AA1L020 520 aaKnown RBP7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 LEUTXA8MZ59 168 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 LOC110117498-PIK3R3F6TDL0 507 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 M0QZK8 103 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 MMP23AO75900 390 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 IGLV1-47P01700 117 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 RAP2AP10114 183 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 CCL1P22362 96 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 CD24P25063 80 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 PEX2P28328 305 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 SLC6A1P30531 599 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 THBS3P49746 956 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 MNAT1P51948 309 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 ARHGDIBP52566 201 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 MS4A2Q01362 244 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 MFGE8Q08431 387 aaPredicted RBP7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 KIAA2026Q5HYC2 2103 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 SLX4IPQ5VYV7 408 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 C10orf99Q6UWK7 81 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 TMEM179BQ7Z7N9 219 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 EGFL6Q8IUX8 553 aa7.83□□□□□ -1.16
TRAFD1-207ENST00000550051 ENTHD1Q8IYW4 607 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms